RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	VPS36	Q86VN1	386 aa		27.99	■■■□□ 2.07
U2AF1-208	ENST00000471250	SHC3	Q92529	594 aa		27.99	■■■□□ 2.07
U2AF1-208	ENST00000471250	LUC7L	Q9NQ29	371 aa	Known RBP	27.99	■■■□□ 2.07
U2AF1-208	ENST00000471250	CASQ1	P31415	396 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	BMS1	Q14692	1282 aa	Known RBP	27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	ARHGEF6	Q15052	776 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	KCNA10	Q16322	511 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	DUOXA2	Q1HG44	320 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	ZNF569	Q5MCW4	686 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	TAF2	Q6P1X5	1199 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	CATSPER4	Q7RTX7	472 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	TMEM192	Q8IY95	271 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	FAM71A	Q8IYT1	594 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	ADPGK	Q9BRR6	497 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	SYT11	Q9BT88	431 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	C1orf112	Q9NSG2	853 aa		27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	DDX20	Q9UHI6	824 aa	Known RBP	27.98	■■■□□ 2.07
U2AF1-208	ENST00000471250	PHACTR2	O75167	634 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	ASGR1	P07306	291 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	EIF4B	P23588	611 aa	Known RBP	27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	TERF1	P54274	439 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	NCBP1	Q09161	790 aa	Known RBP	27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	C10orf76	Q5T2E6	689 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	OLIG1	Q8TAK6	271 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	NENF	Q9UMX5	172 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	CXCL8	P10145	99 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	HOXA11	P31270	313 aa	Predicted RBP	27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	CRYBB1	P53674	252 aa	Predicted RBP	27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	DCAF4L1	Q3SXM0	396 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	TRAPPC11	Q7Z392	1133 aa		27.97	■■■□□ 2.07
U2AF1-208	ENST00000471250	DDX3X	O00571	662 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	NCOA4	Q13772	614 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	SNX17	Q15036	470 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	SESTD1	Q86VW0	696 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	EFCAB13	Q8IY85	973 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	SLC30A5	Q8TAD4	765 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	ZNF296	Q8WUU4	475 aa	Predicted RBP	27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	MTMR12	Q9C0I1	747 aa		27.96	■■■□□ 2.07
U2AF1-208	ENST00000471250	AXL	P30530	894 aa		27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	PRMT2	P55345	433 aa		27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	GDF6	Q6KF10	455 aa	Predicted RBP	27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	SLC35F6	Q8N357	371 aa		27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	PCSK9	Q8NBP7	692 aa	Known RBP	27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	LNX1	Q8TBB1	728 aa	Predicted RBP	27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	ELMO3	Q96BJ8	720 aa		27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	NAGPA	Q9UK23	515 aa		27.95	■■■□□ 2.07
U2AF1-208	ENST00000471250	LACTBL1	A8MY62	500 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	RIOK3	O14730	519 aa	Known RBP	27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	MEFV	O15553	781 aa	Predicted RBP	27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	NAB2	Q15742	525 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	ANKRD36BP1	Q96IX9	119 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	ASB7	Q9H672	318 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	APOBEC3G	Q9HC16	384 aa	Known RBP	27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	DUSP10	Q9Y6W6	482 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	ATP8B3	O60423	1300 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	TNNC2	P02585	160 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	TMEM191B	P0C7N4	346 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	GRM5	P41594	1212 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	TFAM	Q00059	246 aa	Known RBP	27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	ALKBH5	Q6P6C2	394 aa	Known RBP	27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	NOTUM	Q6P988	496 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	SLAIN1	Q8ND83	568 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	TMEM40	Q8WWA1	233 aa		27.94	■■■□□ 2.06
U2AF1-208	ENST00000471250	MROH7	Q68CQ1	1323 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	CST3	P01034	146 aa	Predicted RBP	27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	USP8	P40818	1118 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	SLC10A6	Q3KNW5	377 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	SPOPL	Q6IQ16	392 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	SLC27A1	Q6PCB7	646 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	ACAP3	Q96P50	834 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	AGPAT1	Q99943	283 aa		27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	CELF4	Q9BZC1	486 aa	Known RBP	27.93	■■■□□ 2.06
U2AF1-208	ENST00000471250	NPTXR	O95502	500 aa		27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	TNFAIP3	P21580	790 aa		27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	NOP14	P78316	857 aa	Known RBP	27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	FAM47C	Q5HY64	1035 aa		27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	RNF180	Q86T96	592 aa		27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	SECISBP2L	Q93073	1101 aa	Known RBP	27.92	■■■□□ 2.06
U2AF1-208	ENST00000471250	CYP26A1	O43174	497 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	ASS1	P00966	412 aa	Known RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	MYCN	P04198	464 aa	Predicted RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	INHA	P05111	366 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	MRPS6	P82932	125 aa	Known RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	SCARA3	Q6AZY7	606 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	MYRIP	Q8NFW9	859 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	DHX38	Q92620	1227 aa	Known RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	IMPG2	Q9BZV3	1241 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	L2HGDH	Q9H9P8	463 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	SGPL1	O95470	568 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	TBXAS1	P24557	533 aa	Predicted RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	CUL2	Q13617	745 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	RSPH3	Q86UC2	560 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	SERINC5	Q86VE9	423 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	GLYCTK	Q8IVS8	523 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	U2AF1L4	Q8WU68	220 aa	Known RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	CCDC94	Q9BW85	323 aa	Predicted RBP	27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	NUB1	Q9Y5A7	615 aa		27.91	■■■□□ 2.06
U2AF1-208	ENST00000471250	GRIN2D	O15399	1336 aa		27.9	■■■□□ 2.06
U2AF1-208	ENST00000471250	CABYR	O75952	493 aa		27.9	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms