RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 ZFP42Q96MM3 310 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
FN1-217ENST00000471193 TSPAN18Q96SJ8 248 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
FN1-217ENST00000471193 MTMR12Q9C0I1 747 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 TMEM117Q9H0C3 514 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 MMRN2Q9H8L6 949 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 TMEM8AQ9HCN3 771 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 RNF19AQ9NV58 838 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 KLK14Q9P0G3 267 aa12.58□□□□□ -0.4
FN1-217ENST00000471193 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 CITO14578 2027 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 ARL5CA6NH57 179 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 PES1O00541 588 aaKnown RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 P4HA2O15460 535 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 TEX33O43247 280 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 TPM3P06753 285 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 IBSPP21815 317 aaPredicted RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 GCLMP48507 274 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 ZNF75DP51815 510 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 EPHB4P54760 987 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 WDR5P61964 334 aaKnown RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 NR1I3Q14994 352 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 ZACNQ401N2 412 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 GLRA4Q5JXX5 417 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 CLLU1OSQ5K130 101 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 FKBP15Q5T1M5 1219 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 TDRD10Q5VZ19 366 aaKnown RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 KRT39Q6A163 491 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
FN1-217ENST00000471193 SV2AQ7L0J3 742 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 MRFAP1L1Q96HT8 127 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 GAD1Q99259 594 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
FN1-217ENST00000471193 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
FN1-217ENST00000471193 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 HOXA2O43364 376 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 OFD1O75665 1012 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 AMHP03971 560 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
FN1-217ENST00000471193 TMEM191BP0C7N4 346 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 FGFR1P11362 822 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 PBX1P40424 430 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 SCNN1GP51170 649 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 DEFB103AP81534 67 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 TFAMQ00059 246 aaKnown RBP12.56□□□□□ -0.4
FN1-217ENST00000471193 UBXN1Q04323 297 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 NAB2Q15742 525 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 GLB1LQ6UWU2 654 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 HELQQ8TDG4 1101 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 RSPH1Q8WYR4 309 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 ANKRD36BP1Q96IX9 119 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
FN1-217ENST00000471193 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 LBHD1Q9BQE6 289 aaPredicted RBP12.56□□□□□ -0.4
FN1-217ENST00000471193 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.4
FN1-217ENST00000471193 TUBGCP4Q9UGJ1 667 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 LRFN2Q9ULH4 789 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
FN1-217ENST00000471193 PLAGL2Q9UPG8 496 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 COQ4Q9Y3A0 265 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 PCDHB7Q9Y5E2 793 aa12.56□□□□□ -0.4
FN1-217ENST00000471193 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 VNN1O95497 513 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 TNNC2P02585 160 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 FGBP02675 491 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 CYP3A5P20815 502 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 GRIK3Q13003 919 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 BIRC3Q13489 604 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 ZNF365Q70YC5 407 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 TRAPPC11Q7Z392 1133 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 CXorf38Q8TB03 319 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 C18orf25Q96B23 403 aaPredicted RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 MIOSQ9NXC5 875 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 GCNT4Q9P109 453 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 ITGA11Q9UKX5 1188 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 INPP5FQ9Y2H2 1132 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
FN1-217ENST00000471193 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
FN1-217ENST00000471193 TTC3P53804 2025 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms