RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DIRC3C9JPN6 131 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 NDUFS2O75306 463 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 RAP2AP10114 183 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 IL2RBP14784 551 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 MGAT1P26572 445 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 SLC6A4P31645 630 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 PER3P56645 1201 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 RRP12Q5JTH9 1297 aaKnown RBP6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 LY6G5CQ5SRR4 150 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 OR56A1Q8NGH5 318 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 CCHCR1Q8TD31 782 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 PHACTR3Q96KR7 559 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 DMRTA2Q96SC8 542 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 UHRF1Q96T88 793 aaPredicted RBP6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 ZSWIM1Q9BR11 485 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 ALG13Q9NP73 1137 aaKnown RBP6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 SERPINB13Q9UIV8 391 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 WASHC2CQ9Y4E1 1318 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 ENDOD1O94919 500 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 CFIP05156 583 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 OCA2Q04671 838 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 TP53BP2Q13625 1128 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 FAM50AQ14320 339 aaKnown RBP6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 TSHZ3Q63HK5 1081 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 ZNF529Q6P280 563 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 Q6YL49 198 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 PLXDC1Q8IUK5 500 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 ASB10Q8WXI3 467 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 FUBP3Q96I24 572 aaKnown RBP eCLIP6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 FAM193BQ96PV7 902 aaPredicted RBP6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 RUVBL1Q9Y265 456 aaKnown RBP6.75□□□□□ -1.33
PRPF40A-206ENST00000471167 AATKQ6ZMQ8 1374 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 RAMP2O60895 175 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 GPR32O75388 356 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 ZFPL1O95159 310 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 SPDEFO95238 335 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 ATP5JP18859 108 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 GCSHP23434 173 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 FSTL1Q12841 308 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 RESTQ13127 1097 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 C3orf36Q3SXR2 165 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 RNF187Q5TA31 235 aaPredicted RBP6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 NACC2Q96BF6 587 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 PCDHA13Q9Y5I0 950 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 EPN1Q9Y6I3 576 aaPredicted RBP6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 FPGT-TNNI3KV9GXZ4 949 aa6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
PRPF40A-206ENST00000471167 POLR2AP24928 1970 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 TCRBV7S2A1N4TA0A589 114 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 HTRA2O43464 458 aaPredicted RBP6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 GCP02774 474 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 SBK3P0C264 359 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 MYBL2P10244 700 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 DDCP20711 480 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 IL10RAQ13651 578 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 PTPAQ15257 358 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 CLUL1Q15846 466 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 TMEM132CQ8N3T6 1108 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 CYFIP2Q96F07 1278 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 TEKT5Q96M29 485 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 MKS1Q9NXB0 559 aa6.73□□□□□ -1.33
PRPF40A-206ENST00000471167 FAM171A2A8MVW0 826 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 OVOL3O00110 214 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 ZRANB2O95218 330 aaKnown RBP eCLIP6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 POMCP01189 267 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 EGR2P11161 476 aaPredicted RBP6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 NOMO3P69849 1222 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 ITKQ08881 620 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 SLFN5Q08AF3 891 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 FOXI1Q12951 378 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 NOMO2Q5JPE7 1267 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 MAPKAPK5Q8IW41 473 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 AMOTL1Q8IY63 956 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 DRC7Q8IY82 874 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 Q8NA96 180 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 IFI44Q8TCB0 444 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 SSH1Q8WYL5 1049 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 LINC00476Q8WZB0 136 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 COA7Q96BR5 231 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 GPATCH3Q96I76 525 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 ASPSCR1Q9BZE9 553 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 SYNPO2LQ9H987 977 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 PCDH12Q9NPG4 1184 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 MOCS1Q9NZB8 636 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 HSFX1Q9UBD0 423 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 USP25Q9UHP3 1055 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 PCDHB1Q9Y5F3 818 aa6.72□□□□□ -1.33
PRPF40A-206ENST00000471167 A0A1B0GTW7 788 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 PIPSLA2A3N6 862 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
PRPF40A-206ENST00000471167 TMEM191CA6NGB0 347 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms