RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 BAP1Q92560 729 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 SYN2Q92777 582 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 SEMA4DQ92854 862 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ANKRD36BP1Q96IX9 119 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 NAA15Q9BXJ9 866 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 KCNF1Q9H3M0 494 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 TMX1Q9H3N1 280 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 NXF3Q9H4D5 531 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 RAB20Q9NX57 234 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 SNTG2Q9NY99 539 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 APEX2Q9UBZ4 518 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 IPPQ9Y573 584 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 PCDHB2Q9Y5E7 798 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 BRCA2P51587 3418 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 NRDCO43847 1150 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 RECQL4O94761 1208 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 VNN1O95497 513 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 HLA-DRAP01903 254 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TNNC2P02585 160 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 NFICP08651 508 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TMEM191BP0C7N4 346 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 SKIP12755 728 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 KCNE1P15382 129 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 PIK3CAP42336 1068 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TFAMQ00059 246 aaKnown RBP9.4□□□□□ -0.9
HDLBP-233ENST00000470710 GOLGA8FQ08AF8 430 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 GOLGA8DPQ0D2H9 430 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 FAAP100Q0VG06 881 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 BIRC3Q13489 604 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 MEA1Q16626 185 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 JADE1Q6IE81 842 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 PDXDC1Q6P996 788 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TRAPPC11Q7Z392 1133 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 CACNA2D4Q7Z3S7 1137 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 NECAB2Q7Z6G3 386 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 MRPL10Q7Z7H8 261 aaKnown RBP9.4□□□□□ -0.9
HDLBP-233ENST00000470710 FMNL3Q8IVF7 1028 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 PAWRQ96IZ0 340 aaKnown RBP9.4□□□□□ -0.9
HDLBP-233ENST00000470710 FAM81BQ96LP2 452 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 IFIH1Q9BYX4 1025 aaKnown RBP9.4□□□□□ -0.9
HDLBP-233ENST00000470710 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 HIPK3Q9H422 1215 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 ABHD10Q9NUJ1 306 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 TBX21Q9UL17 535 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-233ENST00000470710 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.9
HDLBP-233ENST00000470710 DNAH12Q6ZR08 3092 aa9.4□□□□□ -0.91
HDLBP-233ENST00000470710 A0A0U1RQF3 1178 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 MGEA5O60502 916 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 NBNO60934 754 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 PHACTR2O75167 634 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 CXCL10P02778 98 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 JAM2P57087 298 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 CCZ1BP86790 482 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 CCZ1P86791 482 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 CDK17Q00537 523 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 APBA1Q02410 837 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 GCNT1Q02742 428 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 LRMPQ12912 555 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 NCOA4Q13772 614 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 GPNMBQ14956 572 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 ZBTB6Q15916 424 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 LRRC26Q2I0M4 334 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 PLEKHG4Q58EX7 1191 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 IQCEQ6IPM2 695 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 RRAGAQ7L523 313 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 ENOSF1Q7L5Y1 443 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 UBE2Q1Q7Z7E8 422 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 TMEM139Q8IV31 216 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 APBB2Q92870 758 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 FAM84AQ96KN4 292 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 NT5C1BQ96P26 610 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 BAG1Q99933 345 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 ADAM2Q99965 735 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 FTHL17Q9BXU8 183 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 STK33Q9BYT3 514 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 GIT1Q9Y2X7 761 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 HES2Q9Y543 173 aa9.39□□□□□ -0.91
HDLBP-233ENST00000470710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDLBP-233ENST00000470710 LRRC53A6NM62 1247 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 C9IYK1 514 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ARHGAP6O43182 974 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
HDLBP-233ENST00000470710 LRRN2O75325 713 aa9.38□□□□□ -0.91
HDLBP-233ENST00000470710 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms