RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 TMEM132BQ14DG7 1078 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 ZNF174Q15697 407 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 CD300LDQ6UXZ3 194 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 B3GNT8Q7Z7M8 397 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 PRPF38AQ8NAV1 312 aaKnown RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 CCDC8Q9H0W5 538 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 GBA2Q9HCG7 927 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 ACSS2Q9NR19 701 aa7.42□□□□□ -1.22
PTCD3-208ENST00000469585 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
PTCD3-208ENST00000469585 COL4A5P29400 1685 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 PSME4Q14997 1843 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 PRAMEF25A6NGN4 478 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 GPR39O43194 453 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 PFKLP17858 780 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 ADORA1P30542 326 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 NKX3-2P78367 333 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 DBPQ10586 325 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-208ENST00000469585 DEFB115Q30KQ5 88 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 ANKRD45Q5TZF3 282 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 CD276Q5ZPR3 534 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 ZC3H18Q86VM9 953 aaKnown RBP7.41□□□□□ -1.22
PTCD3-208ENST00000469585 ATL2Q8NHH9 583 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 KCNN1Q92952 543 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 MXD3Q9BW11 206 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 DEFB129Q9H1M3 183 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 PCIF1Q9H4Z3 704 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 RBPJLQ9UBG7 517 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 PGAP2Q9UHJ9 254 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 A0A1B0GUL6 1792 aa7.41□□□□□ -1.22
PTCD3-208ENST00000469585 TCP10L2B9ZVM9 353 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 ETV2O00321 342 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 FOXP2O15409 715 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 KRT1P04264 644 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 CYP17A1P05093 508 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 FNTBP49356 437 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 HUNKP57058 714 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 IGBP1P78318 339 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 HDAC1Q13547 482 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 SMAD2Q15796 467 aaKnown RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 FKBP1CQ5VVH2 108 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 RNF219Q5W0B1 726 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 OTUD7BQ6GQQ9 843 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 ASB15Q8WXK1 588 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 DDX11Q96FC9 970 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 CDCA5Q96FF9 252 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 FAM84AQ96KN4 292 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 DCTPP1Q9H773 170 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 TDRD3Q9H7E2 651 aaKnown RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 ECHDC1Q9NTX5 307 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 USP40Q9NVE5 1235 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 HMG20BQ9P0W2 317 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 BTBD7Q9P203 1132 aa7.4□□□□□ -1.22
PTCD3-208ENST00000469585 ZNF70Q9UC06 446 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-208ENST00000469585 COL4A1P02462 1669 aa7.4□□□□□ -1.23
PTCD3-208ENST00000469585 UTRNP46939 3433 aa7.4□□□□□ -1.23
PTCD3-208ENST00000469585 ARAP2Q8WZ64 1704 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 MROH7-TTC4A0A0A0MT08 1334 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 TTC41PQ6P2S7 1318 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 PASKQ96RG2 1323 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 SHTN1A0MZ66 631 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ADM5C9JUS6 153 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 HLA-DOAP06340 250 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 MMEP08473 750 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 CYP2C8P10632 490 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 GLDCP23378 1020 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 AOAHP28039 575 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 PRDX5P30044 214 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 MCAMP43121 646 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 BTDP43251 543 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ANAPC15P60006 121 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 MAP2K1Q02750 393 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-208ENST00000469585 MECOMQ03112 1051 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ATP13A4Q4VNC1 1196 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
PTCD3-208ENST00000469585 LIPIQ6XZB0 460 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 SYDE1Q6ZW31 735 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-208ENST00000469585 FAM83AQ86UY5 434 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 TMEFF1Q8IYR6 380 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 CERS5Q8N5B7 392 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 EAF2Q96CJ1 260 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-208ENST00000469585 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 PAG1Q9NWQ8 432 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 DBNLQ9UJU6 430 aaKnown RBP7.39□□□□□ -1.23
PTCD3-208ENST00000469585 SCN9AQ15858 1988 aa7.39□□□□□ -1.23
PTCD3-208ENST00000469585 ZNF839A8K0R7 811 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 GOLIM4O00461 696 aa7.38□□□□□ -1.23
PTCD3-208ENST00000469585 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 ZFYP08048 801 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-208ENST00000469585 ATP5JP18859 108 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms