RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 FNTBP49356 437 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 RNF144AP50876 292 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 MFAP1P55081 439 aaKnown RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 PSMA6P60900 246 aaKnown RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SHC2P98077 582 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SATB1Q01826 763 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 DSG1Q02413 1049 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 ZBTB41Q5SVQ8 909 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 JAKMIP3Q5VZ66 844 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 MIS18BP1Q6P0N0 1132 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 GLB1LQ6UWU2 654 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SND1Q7KZF4 910 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 HEATR3Q7Z4Q2 680 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 MB21D2Q8IYB1 491 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF295-AS1Q8N0V1 137 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 LINC00528Q8N1L1 170 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 ING5Q8WYH8 240 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 STAMQ92783 540 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SHDQ96IW2 340 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 C2orf49Q9BVC5 232 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 LRRC2Q9BYS8 371 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 RHOBTB2Q9BYZ6 727 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 MINDY3Q9H8M7 445 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF395Q9H8N7 513 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 DIAPH3Q9NSV4 1193 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 PIN4Q9Y237 131 aaKnown RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 HES2Q9Y543 173 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 PCDHB2Q9Y5E7 798 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SPEGQ15772 3267 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 FLNBO75369 2602 aaKnown RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 CACNA1EQ15878 2313 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 GON4LQ3T8J9 2241 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 IPO5O00410 1097 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 AXIN1O15169 862 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CCL16O15467 120 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 MAGEB2O15479 319 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF623O75123 536 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 DGAT1O75907 488 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 RETP07949 1114 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SMARCA1P28370 1054 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 OR1G1P47890 313 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 GLUD2P49448 558 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 NT5C2P49902 561 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 PRKCQQ04759 706 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 RING1Q06587 406 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SIM2Q14190 667 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 TEAD4Q15561 434 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 TARBP2Q15633 366 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CSRP2Q16527 193 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SLC5A9Q2M3M2 681 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 RTP2Q5QGT7 225 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 TMCO4Q5TGY1 634 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 HEATR6Q6AI08 1181 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 LAIR1Q6GTX8 287 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 TANGO2Q6ICL3 276 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 UNQ6494/PRO21346Q6UXR6 183 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 MRPL10Q7Z7H8 261 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SMG8Q8ND04 991 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CTCFLQ8NI51 663 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CRYGNQ8WXF5 182 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SECISBP2LQ93073 1101 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 PHKBQ93100 1093 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 MCRS1Q96EZ8 462 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SCLT1Q96NL6 688 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 MAP7D2Q96T17 732 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 PAAF1Q9BRP4 392 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 EIF2AQ9BY44 585 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 OSBPL6Q9BZF3 934 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 GRIP2Q9C0E4 1043 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CXCL16Q9H2A7 254 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 RIC8AQ9NPQ8 531 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CHST12Q9NRB3 414 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 RBM12Q9NTZ6 932 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 DACT1Q9NYF0 836 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 DNMT3BQ9UBC3 853 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 SEC63Q9UGP8 760 aaKnown RBP5.94□□□□□ -1.46
PTPN4-209ENST00000469511 CDH7Q9ULB5 785 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 WASF3Q9UPY6 502 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 NCANO14594 1321 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 ASXL3Q9C0F0 2248 aa5.94□□□□□ -1.46
PTPN4-209ENST00000469511 ARID2Q68CP9 1835 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ERICH2A1L162 156 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SMCO2A6NFE2 343 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 FAM187AA6NFU0 413 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SOWAHDA6NJG2 315 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SRRM3A6NNA2 597 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 DDAH1O94760 285 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 KCNK5O95279 499 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 HOXA11P31270 313 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF76P36508 570 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SREBF1P36956 1147 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 RPS9P46781 194 aaKnown RBP5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SERPINB4P48594 390 aa5.93□□□□□ -1.46
PTPN4-209ENST00000469511 SCNN1GP51170 649 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms