RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 ORC1Q13415 861 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 MYBPC2Q14324 1141 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 MSTO1Q9BUK6 570 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 EPN3Q9H201 632 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 RBAKQ9NYW8 714 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-221ENST00000469415 KIAA0754O94854 1291 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 LRRC14Q15048 493 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 MMS22LQ6ZRQ5 1243 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 OTUD6BQ8N6M0 293 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 ACAD9Q9H845 621 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 ZDHHC18Q9NUE0 388 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 TBK1Q9UHD2 729 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 MTUS1Q9ULD2 1270 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 R3HDM2Q9Y2K5 976 aaKnown RBP19.07■□□□□ 0.64
MCF2L-221ENST00000469415 MIF4GDA9UHW6 222 aaKnown RBP19.06■□□□□ 0.64
MCF2L-221ENST00000469415 P4HA2O15460 535 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 RFX1P22670 979 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 COILP38432 576 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-221ENST00000469415 PTGIRP43119 386 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 LONRF1Q17RB8 773 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 TREML2Q5T2D2 321 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 DCAF15Q66K64 600 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 ACAD10Q6JQN1 1059 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 DPH6Q7L8W6 267 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 C12orf56Q8IXR9 622 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 ZNF302Q9NR11 478 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 GRHL1Q9NZI5 618 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 THAP12O43422 761 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 PGK2P07205 417 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 GPC3P51654 580 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 PPP2R2AP63151 447 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 IRX3P78415 501 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-221ENST00000469415 MTMR3Q13615 1198 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 DDX1Q92499 740 aaKnown RBP19.06■□□□□ 0.64
MCF2L-221ENST00000469415 GTF3C4Q9UKN8 822 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 STBD1O95210 358 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 CDR1P51861 262 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 KRT17Q04695 432 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 GNPTABQ3T906 1256 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 TRAPPC12Q8WVT3 735 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 APOBEC3GQ9HC16 384 aaKnown RBP19.06■□□□□ 0.64
MCF2L-221ENST00000469415 CAPN7Q9Y6W3 813 aa19.06■□□□□ 0.64
MCF2L-221ENST00000469415 GRIN3BO60391 1043 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 KRT10P13645 584 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 TCF4P15884 667 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 GLRA2P23416 452 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 LY6KQ17RY6 165 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 C11orf63Q6NUN7 778 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 MIS18BP1Q6P0N0 1132 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 CPLX4Q7Z7G2 160 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 CD302Q8IX05 232 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 MCPH1Q8NEM0 835 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 SLC7A3Q8WY07 619 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 RAPGEF5Q92565 580 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 GPRASP2Q96D09 838 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 RGS16O15492 202 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-221ENST00000469415 GZMAP12544 262 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 CHRNA3P32297 505 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 CALCOCO2Q13137 446 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 ABHD15Q6UXT9 468 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 GADL1Q6ZQY3 521 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 MOB2Q70IA6 237 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 FMNL3Q8IVF7 1028 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 MFSD14AQ96MC6 490 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 WNT8AQ9H1J5 351 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 AS3MTQ9HBK9 375 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 GGT7Q9UJ14 662 aa19.05■□□□□ 0.64
MCF2L-221ENST00000469415 SPDYE16A6NNV3 312 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-221ENST00000469415 MAGEA9P43362 315 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CLEC16AQ2KHT3 1053 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 TMEM63BQ5T3F8 832 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 THNSL1Q8IYQ7 743 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 ADAM22Q9P0K1 906 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CTNNAL1Q9UBT7 734 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 ECEL1O95672 775 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CST3P01034 146 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-221ENST00000469415 WEE2P0C1S8 567 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 RALAP11233 206 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CREB1P16220 341 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 ATF7P17544 494 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-221ENST00000469415 CHKAP35790 457 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 MCOLN2Q8IZK6 566 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 EPB41L4BQ9H329 900 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 NUB1Q9Y5A7 615 aa19.04■□□□□ 0.64
MCF2L-221ENST00000469415 SUPT20HL2P0C7V6 817 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 SUPT20HL1Q3ZLR7 823 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 TTC31Q49AM3 519 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 USP37Q86T82 979 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 MTRF1LQ9UGC7 380 aaKnown RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 TTC7AQ9ULT0 858 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 PCDHA3Q9Y5H8 950 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 CYP1A2P05177 515 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 GNA15P30679 374 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 ADCY8P40145 1251 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 TAS2R40P59535 323 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 ZNF280AP59817 542 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-221ENST00000469415 STXBP2Q15833 593 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 XKR3Q5GH77 459 aa19.03■□□□□ 0.64
MCF2L-221ENST00000469415 LRIG3Q6UXM1 1119 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms