RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 WDR49Q8IV35 697 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 CRIPAKQ8N1N5 446 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 CEP120Q8N960 986 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 SMG8Q8ND04 991 aaKnown RBP8.85□□□□□ -0.99
NPHP3-204ENST00000469232 CXorf38Q8TB03 319 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 LINC01599Q8WXQ3 324 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 ZNF516Q92618 1163 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 CGRRF1Q99675 332 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 ADPGKQ9BRR6 497 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 EIF2AQ9BY44 585 aaKnown RBP8.85□□□□□ -0.99
NPHP3-204ENST00000469232 WNT8AQ9H1J5 351 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 TMEM8AQ9HCN3 771 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 NPDC1Q9NQX5 325 aaPredicted RBP8.85□□□□□ -0.99
NPHP3-204ENST00000469232 RBAKQ9NYW8 714 aaPredicted RBP8.85□□□□□ -0.99
NPHP3-204ENST00000469232 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 ANKFY1Q9P2R3 1169 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 IMPACTQ9P2X3 320 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 C2CD2Q9Y426 696 aa8.85□□□□□ -0.99
NPHP3-204ENST00000469232 C9IYK1 514 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 MGEA5O60502 916 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 PQBP1O60828 265 aaKnown RBP8.84□□□□□ -0.99
NPHP3-204ENST00000469232 TPM2P07951 284 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CLTBP09497 229 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 GHRP10912 638 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 KCNE1P15382 129 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 ATF7P17544 494 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-204ENST00000469232 FECHP22830 423 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CD52P31358 61 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 RFC2P35250 354 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 TNFSF9P41273 254 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 RAB27AP51159 221 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 UBXN1Q04323 297 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CCDC173Q0VFZ6 552 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 PAK2Q13177 524 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CBWD6Q4V339 395 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CBWD3Q5JTY5 395 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CBWD5Q5RIA9 395 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 SPECC1LQ69YQ0 1117 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 ZBTB33Q86T24 672 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 RTN4RL1Q86UN2 441 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-204ENST00000469232 TMEM192Q8IY95 271 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 APBB2Q92870 758 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 SNX27Q96L92 541 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 TCHPQ9BT92 498 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 FTHL17Q9BXU8 183 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 HIPK3Q9H422 1215 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 SIX2Q9NPC8 291 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 RGS18Q9NS28 235 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 CNTN3Q9P232 1028 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 PIN4Q9Y237 131 aaKnown RBP8.84□□□□□ -0.99
NPHP3-204ENST00000469232 GINS2Q9Y248 185 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
NPHP3-204ENST00000469232 PTPRJQ12913 1337 aa8.84□□□□□ -0.99
NPHP3-204ENST00000469232 PDCD11Q14690 1871 aaKnown RBP8.84□□□□□ -1
NPHP3-204ENST00000469232 A0A1W2PQJ5 194 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 C3orf80F5H4A9 247 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 NOL4O94818 638 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 NPTXRO95502 500 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 TRIM49P0CI25 452 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 TRIM49CP0CI26 452 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 SKIP12755 728 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 PON1P27169 355 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 SYCP1Q15431 976 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 KRT39Q6A163 491 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 SV2AQ7L0J3 742 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CDR2LQ86X02 465 aaPredicted RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 EFCAB13Q8IY85 973 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 THNSL1Q8IYQ7 743 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 RDH13Q8NBN7 331 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 FAXDC2Q96IV6 333 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 ACAP3Q96P50 834 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CCDC94Q9BW85 323 aaPredicted RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 NAA15Q9BXJ9 866 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 GANQ9H2C0 597 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 ELAC1Q9H777 363 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 RPF1Q9H9Y2 349 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 PDE11AQ9HCR9 933 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 FAM105AQ9NUU6 356 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 IPPQ9Y573 584 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 PCDHB2Q9Y5E7 798 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 ALPK3Q96L96 1907 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 UMODL1Q5DID0 1318 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CITO14578 2027 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 LACTBL1A8MY62 500 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 ZC3H11AO75152 810 aaKnown RBP eCLIP8.83□□□□□ -1
NPHP3-204ENST00000469232 EOMESO95936 686 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 TIMP1P01033 207 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CXCL8P10145 99 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CYP3A5P20815 502 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 HNRNPH3P31942 346 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 MXI1P50539 228 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 TRIM14Q14142 442 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 EXOC3L4Q17RC7 722 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 FKBP15Q5T1M5 1219 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 GBP6Q6ZN66 633 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms