RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CCDC150Q8NCX0 1101 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 BEST2Q8NFU1 509 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 CACTINQ8WUQ7 758 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 TMEM174Q8WUU8 243 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 RSPH1Q8WYR4 309 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 SNX27Q96L92 541 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 FAM193BQ96PV7 902 aaPredicted RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 CGRRF1Q99675 332 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TRAIPQ9BWF2 469 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 OSBPL7Q9BZF2 842 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 IMPG2Q9BZV3 1241 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 HAPLN2Q9GZV7 340 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 ASB7Q9H672 318 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 ELAC1Q9H777 363 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 PLEKHA5Q9HAU0 1116 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 SLC38A7Q9NVC3 462 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 DMAC2Q9NW81 257 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TMEM161AQ9NX61 479 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TAB2Q9NYJ8 693 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 CPSF3Q9UKF6 684 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 BOLA1Q9Y3E2 137 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 GBF1Q92538 1859 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 C9IYK1 514 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ENPP3O14638 875 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ZNF623O75123 536 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 UPP2O95045 317 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 AFPP02771 609 aaKnown RBP8.79□□□□□ -1
HDAC6-216ENST00000468949 ADRB2P07550 413 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 TRIM49P0CI25 452 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 TRIM49CP0CI26 452 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 PIK3CAP42336 1068 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 MXI1P50539 228 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 AP3M2P53677 418 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ENPEPQ07075 957 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 TRPC3Q13507 836 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 NCAPHQ15003 741 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 KRT31Q15323 416 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 RAB30Q15771 203 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ENOX2Q16206 610 aaKnown RBP8.79□□□□□ -1
HDAC6-216ENST00000468949 UVSSAQ2YD98 709 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 GLRA4Q5JXX5 417 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ZBTB41Q5SVQ8 909 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 CDKAL1Q5VV42 579 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 Q7L0L9 218 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 NT5DC4Q86YG4 428 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 WDR49Q8IV35 697 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 TMEM192Q8IY95 271 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
HDAC6-216ENST00000468949 TMC2Q8TDI7 906 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 LINC01599Q8WXQ3 324 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 LPPQ93052 612 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 FBXL18Q96ME1 805 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 PCMTD1Q96MG8 357 aaPredicted RBP8.79□□□□□ -1
HDAC6-216ENST00000468949 TSPAN18Q96SJ8 248 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 YME1L1Q96TA2 773 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 MRPL9Q9BYD2 267 aaKnown RBP8.79□□□□□ -1
HDAC6-216ENST00000468949 RBSNQ9H1K0 784 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 PDE11AQ9HCR9 933 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 KLK14Q9P0G3 267 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 SLC4A7Q9Y6M7 1214 aa8.79□□□□□ -1
HDAC6-216ENST00000468949 ARL5CA6NH57 179 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 TBKBP1A7MCY6 615 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 LACTBL1A8MY62 500 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 THP07101 528 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 NFICP08651 508 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 KRT19P08727 400 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 FGFR1P11362 822 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 GTF2H1P32780 548 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 SCNN1GP51170 649 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 COPB1P53618 953 aaKnown RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 UBASH3AP57075 661 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 WDR5P61964 334 aaKnown RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 FANCCQ00597 558 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 GRIK3Q13003 919 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 GPNMBQ14956 572 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 DUOXA2Q1HG44 320 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 VWA3BQ502W6 1294 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 NOMO2Q5JPE7 1267 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 SPOUT1Q5T280 376 aaKnown RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 JADE1Q6IE81 842 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 FAM117BQ6P1L5 589 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 MRPL10Q7Z7H8 261 aaKnown RBP8.78□□□□□ -1
HDAC6-216ENST00000468949 GAS2L3Q86XJ1 694 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 TRIM59Q8IWR1 403 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 LRRC43Q8N309 656 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 ZSWIM2Q8NEG5 633 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 HELQQ8TDG4 1101 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 SLC39A7Q92504 469 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 MFSD14AQ96MC6 490 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 MED15Q96RN5 788 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 SLC9A7Q96T83 725 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 GAD1Q99259 594 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 TRIM5Q9C035 493 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
HDAC6-216ENST00000468949 VPS16Q9H269 839 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms