RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 RAB20Q9NX57 234 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 TRIM10Q9UDY6 481 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 FOXN3O00409 490 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 ZEB2O60315 1214 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 N4BP1O75113 896 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 STK10O94804 968 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CST3P01034 146 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CHRNA1P02708 482 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 HARSP12081 509 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 PTK2Q05397 1052 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 DRAP1Q14919 205 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SNX17Q15036 470 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 ZNF568Q3ZCX4 644 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CACNA2D4Q7Z3S7 1137 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SLC30A5Q8TAD4 765 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 RAET1EQ8TD07 263 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 MAP7D2Q96T17 732 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 HAUS4Q9H6D7 363 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CITO14578 2027 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SSU72P8A0A1W2PR75 194 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 ERICH4A6NGS2 130 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SERPING1P05155 500 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 MCF2P10911 925 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 NAP1L1P55209 391 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CYP27A1Q02318 531 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 GFPT1Q06210 699 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 TRIM71Q2Q1W2 868 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SLC10A6Q3KNW5 377 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 UBXN11Q5T124 520 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 RPAINQ86UA6 219 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 FBXL13Q8NEE6 735 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 EIF2AQ9BY44 585 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 LACRTQ9GZZ8 138 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 B4GALT4O60513 344 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 CXCL8P10145 99 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 EIF4BP23588 611 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SOX5P35711 763 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 KIF11P52732 1056 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 RAPGEF1Q13905 1077 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 ZKSCAN8Q15776 578 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 THNSL1Q8IYQ7 743 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SLC43A3Q8NBI5 491 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 SPOCK3Q9BQ16 436 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 UBE2TQ9NPD8 197 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-208ENST00000468300 DUSP10Q9Y6W6 482 aa8.92□□□□□ -0.98
BRCA1-208ENST00000468300 UMODL1Q5DID0 1318 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 A0A087X0T9 212 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 EVI5O60447 810 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 CCDC175P0C221 793 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 FAM228BP0C875 321 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 ACLYP53396 1101 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 CRYBB1P53674 252 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 OSTNP61366 133 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SPOPLQ6IQ16 392 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 ALKAL1Q6UXT8 129 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 WDR49Q8IV35 697 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 UBR7Q8N806 425 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SLAIN1Q8ND83 568 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 PAIP2Q9BPZ3 127 aaKnown RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SIX4Q9UIU6 781 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SALL4Q9UJQ4 1053 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 LACTBL1A8MY62 500 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 HLA-DRAP01903 254 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 ACO1P21399 889 aaKnown RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 GRK4P32298 578 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 MATR3P43243 847 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 TRAF7Q6Q0C0 670 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 FAM228AQ86W67 206 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 FAM71AQ8IYT1 594 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 LNX1Q8TBB1 728 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SH3TC2Q8TF17 1288 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SHC3Q92529 594 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 WDR24Q96S15 920 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 GCOM2Q9BZD3 368 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 MTMR12Q9C0I1 747 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 SENP6Q9GZR1 1112 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-208ENST00000468300 XYLT2Q9H1B5 865 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 ACP6Q9NPH0 428 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 WBP1LQ9NX94 342 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 DAAM1Q9Y4D1 1078 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 NUB1Q9Y5A7 615 aa8.91□□□□□ -0.98
BRCA1-208ENST00000468300 GFPT2O94808 682 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 NFICP08651 508 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 RFX1P22670 979 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 CDC42EP1Q00587 391 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 ARID5AQ03989 594 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 DNAAF5Q86Y56 855 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 TCHPQ9BT92 498 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 CELF4Q9BZC1 486 aaKnown RBP8.9□□□□□ -0.98
BRCA1-208ENST00000468300 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
BRCA1-208ENST00000468300 DDX3XO00571 662 aaKnown RBP eCLIP8.9□□□□□ -0.981e-8■■■□□ 17.6
BRCA1-208ENST00000468300 TNNI1P19237 187 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 POU5F1Q01860 360 aaKnown RBP8.9□□□□□ -0.98
BRCA1-208ENST00000468300 ASIC2Q16515 512 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 PALB2Q86YC2 1186 aa8.9□□□□□ -0.98
BRCA1-208ENST00000468300 ZMAT2Q96NC0 199 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms