RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.99■□□□□ 0.15
DDX56-208ENST00000467318 ARL5CA6NH57 179 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 UPP2O95045 317 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 MLH1P40692 756 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 DEFB103AP81534 67 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 GAD1Q99259 594 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 CXXC1Q9P0U4 656 aaPredicted RBP15.99■□□□□ 0.15
DDX56-208ENST00000467318 DERAQ9Y315 318 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 C2CD2Q9Y426 696 aa15.99■□□□□ 0.15
DDX56-208ENST00000467318 CITO14578 2027 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 DGKIO75912 1065 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 KCNE1P15382 129 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 EEF1GP26641 437 aaKnown RBP15.98■□□□□ 0.15
DDX56-208ENST00000467318 VAMP7P51809 220 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 CLDN10P78369 228 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 SPAG1Q07617 926 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 CDKAL1Q5VV42 579 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 TMCO2Q7Z6W1 182 aaPredicted RBP15.98■□□□□ 0.15
DDX56-208ENST00000467318 GSTCDQ8NEC7 633 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 ANKRD20A12PQ8NF67 263 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 CNOT6LQ96LI5 555 aaKnown RBP15.98■□□□□ 0.15
DDX56-208ENST00000467318 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 PDE11AQ9HCR9 933 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 KLK14Q9P0G3 267 aa15.98■□□□□ 0.15
DDX56-208ENST00000467318 SMIM28A0A1B0GU29 152 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 XPOTO43592 962 aaKnown RBP15.97■□□□□ 0.15
DDX56-208ENST00000467318 NRDCO43847 1150 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 GJB5O95377 273 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 THP07101 528 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 FGFR1P11362 822 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 ZNF18P17022 549 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 CDK11BP21127 795 aaKnown RBP15.97■□□□□ 0.15
DDX56-208ENST00000467318 AP3M2P53677 418 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 SHHQ15465 462 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 NOMO2Q5JPE7 1267 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 CREBRFQ8IUR6 639 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 WDR49Q8IV35 697 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 HELQQ8TDG4 1101 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 CCDC127Q96BQ5 260 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
DDX56-208ENST00000467318 ZFP42Q96MM3 310 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 MRPL9Q9BYD2 267 aaKnown RBP15.97■□□□□ 0.15
DDX56-208ENST00000467318 RNF19AQ9NV58 838 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 SLC38A7Q9NVC3 462 aa15.97■□□□□ 0.15
DDX56-208ENST00000467318 KCNJ18B7U540 433 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 MEFVO15553 781 aaPredicted RBP15.96■□□□□ 0.15
DDX56-208ENST00000467318 STX10O60499 249 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 DLATP10515 647 aaKnown RBP15.96■□□□□ 0.15
DDX56-208ENST00000467318 ATP2A2P16615 1042 aaKnown RBP15.96■□□□□ 0.15
DDX56-208ENST00000467318 TNNI1P19237 187 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 GRIK3Q13003 919 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 KCNJ12Q14500 433 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 C9orf50Q5SZB4 431 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 TRIM59Q8IWR1 403 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.15
DDX56-208ENST00000467318 ZNF689Q96CS4 500 aaPredicted RBP15.96■□□□□ 0.15
DDX56-208ENST00000467318 CASD1Q96PB1 797 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 LAMA3Q16787 3333 aa15.96■□□□□ 0.15
DDX56-208ENST00000467318 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 PTGESO14684 152 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 TMEM132DQ14C87 1099 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 ZBTB6Q15916 424 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 DUOXA2Q1HG44 320 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 HSP90AA4PQ58FG1 418 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 TCERG1LQ5VWI1 586 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 JADE1Q6IE81 842 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 LRRC8AQ8IWT6 810 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 KIF12Q96FN5 646 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 PPP1R10Q96QC0 940 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 CGRRF1Q99675 332 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 ZBED2Q9BTP6 218 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 UBQLN1Q9UMX0 589 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 INPP5FQ9Y2H2 1132 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 INSL6Q9Y581 213 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
DDX56-208ENST00000467318 LRRIQ3A6PVS8 624 aaPredicted RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 TULP1O00294 542 aaPredicted RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 CYP3A5P20815 502 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 GTF2H1P32780 548 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 SCNN1GP51170 649 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 AFF1P51825 1210 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 WNT7BP56706 349 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 HERC6Q8IVU3 1022 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 PLEKHO2Q8TD55 490 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 SLC35C1Q96A29 364 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 ANKRD36BP1Q96IX9 119 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms