RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PCDHB14Q9Y5E9 798 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 LCTP09848 1927 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 PLIN4Q96Q06 1357 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 IGKV6D-41A0A0C4DH26 115 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 H0Y858 1186 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 IPO8O15397 1037 aaKnown RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 MAFGO15525 162 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 TBX10O75333 385 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 TTLL1O95922 423 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 MMP1P03956 469 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ATF7P17544 494 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ADAM15Q13444 863 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PLEKHG4Q58EX7 1191 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 WIPI1Q5MNZ9 446 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 TMEM63BQ5T3F8 832 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 SFRP5Q5T4F7 317 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 LRFN4Q6PJG9 635 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ERC1Q8IUD2 1116 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 MYOCDQ8IZQ8 938 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 DNERQ8NFT8 737 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 STAG1Q8WVM7 1258 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 RIPOR3Q96MK2 946 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PLCD4Q9BRC7 762 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PHF7Q9BWX1 381 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.37□□□□□ -1.394e-13■■■□□ 17
PTCD3-207ENST00000467273 MAF1Q9H063 256 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-207ENST00000467273 OSBPL2Q9H1P3 480 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 SEMA4AQ9H3S1 761 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 PIF1Q9H611 641 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 TLR9Q9NR96 1032 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 MTMR4Q9NYA4 1195 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 CLIP2Q9UDT6 1046 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 ATG2AQ2TAZ0 1938 aa6.37□□□□□ -1.39
PTCD3-207ENST00000467273 CHD6Q8TD26 2715 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 TMEM232C9JQI7 657 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 GFRA2O00451 464 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 KLF4O43474 513 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 CAND2O75155 1236 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 SLITRK5O94991 958 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 MBD4O95243 580 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ICAM1P05362 532 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ALAS1P13196 640 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 CASTP20810 708 aaKnown RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 PTGS1P23219 599 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 EDNRBP24530 442 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ADD2P35612 726 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 GIPRP48546 466 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 NDUFV1P49821 464 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ATP8B2P98198 1209 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 DLX2Q07687 328 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 PUM1Q14671 1186 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 RALGPS1Q5JS13 557 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ZBTB37Q5TC79 503 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 SLFN13Q68D06 897 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 CTR9Q6PD62 1173 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 DGLUCYQ7Z3D6 616 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 UBALD2Q8IYN6 164 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 TRMT2AQ8IZ69 625 aaKnown RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ADSSL1Q8N142 457 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 EFHBQ8N7U6 833 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 C7orf31Q8N865 590 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 HNRNPLLQ8WVV9 542 aaKnown RBP6.36□□□□□ -1.39
PTCD3-207ENST00000467273 APBB2Q92870 758 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 P2RX5Q93086 422 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 UBE2FQ969M7 185 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 MIPEPQ99797 713 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 ARMT1Q9H993 441 aa6.36□□□□□ -1.39
PTCD3-207ENST00000467273 CYP2D7A0A087X1C5 515 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 FANCGO15287 622 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 PRKAB2O43741 272 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 LRIG2O94898 1065 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CBX7O95931 251 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 F2P00734 622 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 TXNP10599 105 aaKnown RBP6.35□□□□□ -1.39
PTCD3-207ENST00000467273 BMPR1AP36894 532 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 PDE4BQ07343 736 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 IKQ13123 557 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-207ENST00000467273 BMS1Q14692 1282 aaKnown RBP6.35□□□□□ -1.39
PTCD3-207ENST00000467273 UBE3CQ15386 1083 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CLUL1Q15846 466 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 DGKDQ16760 1214 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 TCTN1Q2MV58 587 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 HSP90AB4PQ58FF6 505 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 MUM1L1Q5H9M0 696 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ZNF618Q5T7W0 954 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 RCSD1Q6JBY9 416 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ZSCAN25Q6NSZ9 544 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CCDC62Q6P9F0 684 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 NSMFQ6X4W1 530 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms