RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 ANKRD33Q7Z3H0 272 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-202ENST00000467182 TMEM130Q8N3G9 435 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 ANKLE1Q8NAG6 615 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 CAGE1Q8TC20 777 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 KIAA1524Q8TCG1 905 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 HELQQ8TDG4 1101 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 SNX27Q96L92 541 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 ACAP3Q96P50 834 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 CHP1Q99653 195 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 APEX2Q9UBZ4 518 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 DAAM1Q9Y4D1 1078 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 IPPQ9Y573 584 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 CST3P01034 146 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-202ENST00000467182 CDK17Q00537 523 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
COL4A1-202ENST00000467182 DUOXA2Q1HG44 320 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 RAD9BQ6WBX8 426 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 TRAPPC11Q7Z392 1133 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 CACNA2D4Q7Z3S7 1137 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 CD302Q8IX05 232 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 USP38Q8NB14 1042 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 ZNF397Q8NF99 534 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-202ENST00000467182 SYN2Q92777 582 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-202ENST00000467182 KAT5Q92993 513 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-202ENST00000467182 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 STK33Q9BYT3 514 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 PLEKHA5Q9HAU0 1116 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 MYO6Q9UM54 1294 aa14.04□□□□□ -0.16
COL4A1-202ENST00000467182 DNAH12Q6ZR08 3092 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 SOWAHDA6NJG2 315 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 ZC3H11AO75152 810 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL4A1-202ENST00000467182 RECQL4O94761 1208 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 SELPP16109 830 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 RFX1P22670 979 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 KCNJ6P48051 423 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
COL4A1-202ENST00000467182 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 PAK2Q13177 524 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 MTF1Q14872 753 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 ZBTB6Q15916 424 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 LRRC8DQ7L1W4 858 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 MRPL10Q7Z7H8 261 aaKnown RBP14.03□□□□□ -0.16
COL4A1-202ENST00000467182 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 TATDN2Q93075 761 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 KREMEN1Q96MU8 473 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 ZMAT2Q96NC0 199 aaKnown RBP14.03□□□□□ -0.16
COL4A1-202ENST00000467182 PI4K2AQ9BTU6 479 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 APOBEC3GQ9HC16 384 aaKnown RBP14.03□□□□□ -0.16
COL4A1-202ENST00000467182 FAM105AQ9NUU6 356 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 CNTN3Q9P232 1028 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 SIX4Q9UIU6 781 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 DERAQ9Y315 318 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
COL4A1-202ENST00000467182 UMODL1Q5DID0 1318 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 F8VZ95 297 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TULP1O00294 542 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 ARHGAP6O43182 974 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TNNC2P02585 160 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 AKAP5P24588 427 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TFAMQ00059 246 aaKnown RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 BIRC3Q13489 604 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 BFSP2Q13515 415 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 NCOA4Q13772 614 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 RAPGEF1Q13905 1077 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TRIM60Q495X7 471 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 SFMBT2Q5VUG0 894 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TWF2Q6IBS0 349 aaKnown RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 CYP26C1Q6V0L0 522 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 IRF2BP2Q7Z5L9 587 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 RTN4RL1Q86UN2 441 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 NT5DC4Q86YG4 428 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TMTC1Q8IUR5 882 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 ANKRD36BP1Q96IX9 119 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TOX2Q96NM4 488 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 NT5C1BQ96P26 610 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 TRIM6Q9C030 488 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 XYLT2Q9H1B5 865 aa14.02□□□□□ -0.17
COL4A1-202ENST00000467182 NUCKS1Q9H1E3 243 aaKnown RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
COL4A1-202ENST00000467182 PRDM10Q9NQV6 1147 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms