RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TSPEARQ8WU66 669 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 RAX2Q96IS3 184 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 CCM2LQ9NUG4 571 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 SCOCQ9UIL1 159 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 ATP11BQ9Y2G3 1177 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 INSL6Q9Y581 213 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA9Q9Y5G4 932 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA8Q9Y5G5 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA7Q9Y5G6 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA6Q9Y5G7 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA3Q9Y5H0 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA2Q9Y5H1 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 ATRNL1Q5VV63 1379 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 MAST3O60307 1309 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 GOLGA8AA7E2F4 631 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 CDKL5O76039 1030 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 PDGFRBP09619 1106 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 SNRPA1P09661 255 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 MPLP40238 635 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 IARSP41252 1262 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 SCAND1P57086 179 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 MRPS9P82933 396 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 MXRA7P84157 204 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 SCAPQ12770 1279 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 FAM50AQ14320 339 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 ERCC6LQ2NKX8 1250 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 TRMT2AQ8IZ69 625 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 SIMC1Q8NDZ2 872 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 GPR156Q8NFN8 814 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 OR7D4Q8NG98 312 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 SLC9A6Q92581 669 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 BCO1Q9HAY6 547 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 ADARB2Q9NS39 739 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 KLHL11Q9NVR0 708 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 DPP7Q9UHL4 492 aa6.04□□□□□ -1.44
PRPF40A-205ENST00000467114 PNPLA7Q6ZV29 1317 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 FOSP01100 380 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 ELANEP08246 267 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 ALOX15P16050 662 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 LMO1P25800 156 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 PTPN7P35236 360 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 MPP3Q13368 585 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 LRCH2Q5VUJ6 765 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 FBXO42Q6P3S6 717 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 Q6ZVL8 140 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 MAPKAPK5Q8IW41 473 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 FAM98AQ8NCA5 519 aaKnown RBP6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 REPS2Q8NFH8 660 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 OR56A1Q8NGH5 318 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 RIN2Q8WYP3 895 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 FUBP1Q96AE4 644 aaKnown RBP6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 RNF181Q9P0P0 153 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 EDARQ9UNE0 448 aa6.03□□□□□ -1.44
PRPF40A-205ENST00000467114 WNT10BO00744 389 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 AKR1B10O60218 316 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 ITGAMP11215 1152 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 ZNF37AP17032 561 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 CXCR5P32302 372 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 SP140Q13342 867 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 MUM1Q2TAK8 710 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 GJC2Q5T442 439 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 TMEM132CQ8N3T6 1108 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 TGFBRAP1Q8WUH2 860 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
PRPF40A-205ENST00000467114 AGXTP21549 392 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 ADSLP30566 484 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 ANAPC15P60006 121 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 CDK17Q00537 523 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 RRP12Q5JTH9 1297 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 B3GNTL1Q67FW5 361 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 DRC7Q8IY82 874 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 FUBP3Q96I24 572 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 FAXDC2Q96IV6 333 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 TMEM74BQ9NUR3 256 aa6.01□□□□□ -1.45
PRPF40A-205ENST00000467114 SPATA31A6Q5VVP1 1343 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 FDXRP22570 491 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 ECHS1P30084 290 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 PLA2G5P39877 138 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 ELLP55199 621 aaPredicted RBP6□□□□□ -1.45
PRPF40A-205ENST00000467114 ITKQ08881 620 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 PCBP2Q15366 365 aaKnown RBP eCLIP6□□□□□ -1.45
PRPF40A-205ENST00000467114 ADRM1Q16186 407 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 ABCB5Q2M3G0 1257 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 PLEKHG6Q3KR16 790 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 SPDYE7PQ495Y7 208 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 ZKSCAN2Q63HK3 967 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 TSHZ3Q63HK5 1081 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 MED25Q71SY5 747 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 AUTS2Q8WXX7 1259 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 NELL1Q92832 810 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 PHACTR3Q96KR7 559 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 THRAP3Q9Y2W1 955 aaKnown RBP6□□□□□ -1.45
PRPF40A-205ENST00000467114 SPEF1Q9Y4P9 236 aa6□□□□□ -1.45
PRPF40A-205ENST00000467114 A0A1B0GTW7 788 aa5.99□□□□□ -1.45
PRPF40A-205ENST00000467114 SREBF1P36956 1147 aa5.99□□□□□ -1.45
PRPF40A-205ENST00000467114 PTH2RP49190 550 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms