RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.42■■□□□ 1.98
SDF2L1-202ENST00000466935 NPHP3-ACAD11A0A0J9YXS1 232 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 K7ELQ4 463 aaPredicted RBP27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 CLDN3O15551 220 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 RPL17P18621 184 aaKnown RBP27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 CLCNKBP51801 687 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 OSTNP61366 133 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 KARSQ15046 597 aaKnown RBP27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 HAUS6Q7Z4H7 955 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 CEP57Q86XR8 500 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 FEZF2Q8TBJ5 459 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 LRRC15Q8TF66 581 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 ZNF707Q96C28 371 aaPredicted RBP27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 CLSTN3Q9BQT9 956 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 PARVGQ9HBI0 331 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 ANKFY1Q9P2R3 1169 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 FBXW11Q9UKB1 542 aa27.41■■□□□ 1.98
SDF2L1-202ENST00000466935 RFPL2O75678 378 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 RPL9P32969 192 aaKnown RBP27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 KYAT1Q16773 422 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 FBXL6Q8N531 539 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 SMG7Q92540 1137 aaKnown RBP27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 LARP4BQ92615 738 aaKnown RBP27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 ZBTB45Q96K62 511 aaPredicted RBP27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 PRKD2Q9BZL6 878 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 LIMD1Q9UGP4 676 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 SRPRBQ9Y5M8 271 aaKnown RBP27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 CLIC4Q9Y696 253 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 DOCK8Q8NF50 2099 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 CLUHO75153 1309 aa27.4■■□□□ 1.98
SDF2L1-202ENST00000466935 ZMYND10O75800 440 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 FAM13AO94988 1023 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 SPATA31D3P0C874 917 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 CACNB1Q02641 598 aaPredicted RBP27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 MCM6Q14566 821 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 CD300LGQ6UXG3 332 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 SPATA31D4Q6ZUB0 917 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 GLYCTKQ8IVS8 523 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 ZMAT2Q96NC0 199 aaKnown RBP27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 PLEKHA5Q9HAU0 1116 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 MTRRQ9UBK8 725 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 STK17AQ9UEE5 414 aa27.39■■□□□ 1.98
SDF2L1-202ENST00000466935 PIGRP01833 764 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 HNRNPA1P09651 372 aaKnown RBP eCLIP27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 HOXA9P31269 272 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 SOX4Q06945 474 aaPredicted RBP27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 RAB33AQ14088 237 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 ANKS3Q6ZW76 656 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 RTL10Q7L3V2 364 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 SUGP1Q8IWZ8 645 aaKnown RBP27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 MYCT1Q8N699 235 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 ZSCAN16Q9H4T2 348 aaPredicted RBP27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 GOLGA2P5Q9HBQ8 144 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 FBXO2Q9UK22 296 aaPredicted RBP27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 MTMR6Q9Y217 621 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 BACE2Q9Y5Z0 518 aa27.38■■□□□ 1.97
SDF2L1-202ENST00000466935 TBCAO75347 108 aaKnown RBP27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 KRT18P05783 430 aaKnown RBP27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 CLTAP09496 248 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 HARSP12081 509 aaKnown RBP27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 DDIT3P35638 169 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 DHX8Q14562 1220 aaKnown RBP27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 SLC10A6Q3KNW5 377 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 LIN9Q5TKA1 542 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 KMT2EQ8IZD2 1858 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 C3orf58Q8NDZ4 430 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 BICD1Q96G01 975 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 CCDC39Q9UFE4 941 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 TBX20Q9UMR3 447 aa27.37■■□□□ 1.97
SDF2L1-202ENST00000466935 PODXLO00592 558 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 TRAK2O60296 914 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 POU2F2P09086 479 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 LIG4P49917 911 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 TSPAN18Q96SJ8 248 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 PIDD1Q9HB75 910 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 IGSF9Q9P2J2 1179 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 PIEZO1Q92508 2521 aa27.36■■□□□ 1.97
SDF2L1-202ENST00000466935 K7ENM7 598 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 HNRNPDLO14979 420 aaKnown RBP27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 SYN3O14994 580 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 MEFVO15553 781 aaPredicted RBP27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 ASGR2P07307 311 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 MARCKSP29966 332 aaPredicted RBP27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 TXLNAP40222 546 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 UVSSAQ2YD98 709 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 SNX21Q969T3 373 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 EPSTI1Q96J88 318 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 PRRX2Q99811 253 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.35■■□□□ 1.971e-8■■■■■ 29.8
SDF2L1-202ENST00000466935 EPS15L1Q9UBC2 864 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 MYH15Q9Y2K3 1946 aa27.35■■□□□ 1.97
SDF2L1-202ENST00000466935 STX6O43752 255 aa27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 IGFBP6P24592 240 aaPredicted RBP27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 TKTP29401 623 aaKnown RBP27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 MATR3P43243 847 aaKnown RBP eCLIP27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 GTF2BQ00403 316 aa27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 KRI1Q8N9T8 703 aaKnown RBP27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 NXPE3Q969Y0 559 aa27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 FIZ1Q96SL8 496 aa27.34■■□□□ 1.97
SDF2L1-202ENST00000466935 HAPLN2Q9GZV7 340 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms