RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ZCRB1Q8TBF4 217 aaKnown RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 RIN2Q8WYP3 895 aaPredicted RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 UHRF1Q96T88 793 aaPredicted RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 ADI1Q9BV57 179 aa4.74□□□□□ -1.65
CCDC58-203ENST00000466854 PUS7LQ9H0K6 701 aaKnown RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 CCDC8Q9H0W5 538 aaPredicted RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 CCM2LQ9NUG4 571 aaPredicted RBP4.74□□□□□ -1.65
CCDC58-203ENST00000466854 MKS1Q9NXB0 559 aa4.74□□□□□ -1.65
CCDC58-203ENST00000466854 DNM3Q9UQ16 869 aa4.74□□□□□ -1.65
CCDC58-203ENST00000466854 MYO15BQ96JP2 1530 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 DRGXA6NNA5 263 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 CXorf49A8MYA2 514 aaPredicted RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 SPATA31D3P0C874 917 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 HKR1P10072 659 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 GSPT1P15170 499 aaKnown RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PTPN7P35236 360 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 AVPR1BP47901 424 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 CHN2P52757 468 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 SLC5A3P53794 718 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 IRX6P78412 446 aaPredicted RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 NOMO1Q15155 1222 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PRR16Q569H4 304 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 MUM1L1Q5H9M0 696 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 STRIP1Q5VSL9 837 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 AGAP9Q5VTM2 703 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 SPATA31D4Q6ZUB0 917 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PDZD4Q76G19 769 aaPredicted RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 NECAB2Q7Z6G3 386 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 TRMT2AQ8IZ69 625 aaKnown RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 TSPEARQ8WU66 669 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PAWRQ96IZ0 340 aaKnown RBP4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PCDH12Q9NPG4 1184 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PCDHGA2Q9Y5H1 932 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 FPGT-TNNI3KV9GXZ4 949 aa4.73□□□□□ -1.65
CCDC58-203ENST00000466854 PNPLA7Q6ZV29 1317 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 PJA2O43164 708 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 XPOTO43592 962 aaKnown RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 PHF2O75151 1096 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 CFIP05156 583 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ELANEP08246 267 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 PLA2G5P39877 138 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 IARSP41252 1262 aaKnown RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 PTH2RP49190 550 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ERVK-21P61565 698 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 RESTQ13127 1097 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 MTMR1Q13613 665 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ADRM1Q16186 407 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 PTPROQ16827 1216 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 FAM47AQ5JRC9 791 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ABHD17BQ5VST6 288 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 SYCE2Q6PIF2 218 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 Q6ZVL8 140 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ZNF572Q7Z3I7 529 aaPredicted RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 GPR156Q8NFN8 814 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 FBXO18Q8NFZ0 1043 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ZFP28Q8NHY6 868 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 SMAD5Q99717 465 aaKnown RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 DMRT3Q9NQL9 472 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 TRHDEQ9UKU6 1024 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 GPR45Q9Y5Y3 372 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ATRNL1Q5VV63 1379 aa4.72□□□□□ -1.65
CCDC58-203ENST00000466854 BAZ1AQ9NRL2 1556 aaPredicted RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 ARID4BQ4LE39 1312 aaPredicted RBP4.72□□□□□ -1.65
CCDC58-203ENST00000466854 LOC102724159A0A0B4J2E5 919 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ALG1L2C9J202 215 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ZNF37AP17032 561 aaPredicted RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 CCND1P24385 295 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ECHS1P30084 290 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 CLRN1P58418 232 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 PWP2Q15269 919 aaKnown RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ABCB5Q2M3G0 1257 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 SYDE2Q5VT97 1194 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 RD3Q7Z3Z2 195 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 KCNK18Q7Z418 384 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 PNMA8AQ86V59 439 aaPredicted RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 RHOT2Q8IXI1 618 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.66
CCDC58-203ENST00000466854 SIMC1Q8NDZ2 872 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 OR56A1Q8NGH5 318 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 ORAI2Q96SN7 254 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 GREM2Q9H772 168 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 MRFAP1Q9Y605 127 aa4.71□□□□□ -1.66
CCDC58-203ENST00000466854 CDKL5O76039 1030 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 ESRRBO95718 433 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 LMO1P25800 156 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 MPLP40238 635 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 B3GNTL1Q67FW5 361 aaPredicted RBP4.7□□□□□ -1.66
CCDC58-203ENST00000466854 FBXO42Q6P3S6 717 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.7□□□□□ -1.66
CCDC58-203ENST00000466854 OR7D4Q8NG98 312 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 STON2Q8WXE9 905 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 FAXDC2Q96IV6 333 aa4.7□□□□□ -1.66
CCDC58-203ENST00000466854 PHACTR3Q96KR7 559 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms