RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 PABPC4LP0CB38 370 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 EPHB2P29323 1055 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 CD97P48960 835 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 OXCT1P55809 520 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 SLC29A2Q14542 456 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 KHDC1Q4VXA5 237 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 VWA3BQ502W6 1294 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 LRRC74BQ6ZQY2 392 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 SCYL3Q8IZE3 742 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 PPFIBP2Q8ND30 876 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 NLRC4Q9NPP4 1024 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 HAO1Q9UJM8 370 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 ATP9BO43861 1147 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 LRRC14Q15048 493 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 MTFR1Q15390 333 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 TMEM259Q4ZIN3 620 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 SYN2Q92777 582 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 AGBL1Q96MI9 1066 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-206ENST00000466742 LNPEPQ9UIQ6 1025 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 ITGA4P13612 1032 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 MARK3P27448 753 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 PSMD7P51665 324 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 SLC9C1Q4G0N8 1177 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 DUS1LQ6P1R4 473 aaKnown RBP16.49■□□□□ 0.23
ABCF3-206ENST00000466742 MARK2Q7KZI7 788 aaKnown RBP16.49■□□□□ 0.23
ABCF3-206ENST00000466742 WDR18Q9BV38 432 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
ABCF3-206ENST00000466742 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SUPT3HO75486 399 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SERPING1P05155 500 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 T-ENOLP0DO92 83 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 VAV1P15498 845 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 POLGP54098 1239 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SESN3P58005 492 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 KCNMA1Q12791 1236 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 TTLL12Q14166 644 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SPDYAQ5MJ70 313 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 DUPD1Q68J44 220 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 NELFCDQ8IXH7 590 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 ZNF184Q99676 751 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 ANO3Q9BYT9 981 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SBF1O95248 1867 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 hCG_2014768A0A024R1R8 64 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SMIM23A6NLE4 172 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 TDP2O95551 362 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 UBTFL6P0CB48 400 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 ETS2P15036 469 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 CALCRLQ16602 461 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SPATA24Q86W54 205 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 NME8Q8N427 588 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 METTL13Q8N6R0 699 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 FAM81BQ96LP2 452 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
ABCF3-206ENST00000466742 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
ABCF3-206ENST00000466742 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 NKRFO15226 690 aaKnown RBP eCLIP16.47■□□□□ 0.23
ABCF3-206ENST00000466742 MAP3K7O43318 606 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 SLC37A4O43826 429 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 ALOX15P16050 662 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-206ENST00000466742 UBA7P41226 1012 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
ABCF3-206ENST00000466742 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 EPS8L3Q8TE67 593 aaKnown RBP16.47■□□□□ 0.23
ABCF3-206ENST00000466742 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 ERP27Q96DN0 273 aa16.47■□□□□ 0.23
ABCF3-206ENST00000466742 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms