RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 ASIC1P78348 528 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 GTF2BQ00403 316 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 COASYQ13057 564 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 SMAD2Q15796 467 aaKnown RBP11.11□□□□□ -0.63
CD40-204ENST00000466205 USP41Q3LFD5 358 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CD40-204ENST00000466205 KIAA0319Q5VV43 1072 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 RESP18Q5W5W9 173 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 ADALQ6DHV7 355 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 ZNF720Q7Z2F6 126 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 RNF168Q8IYW5 571 aaPredicted RBP11.11□□□□□ -0.63
CD40-204ENST00000466205 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 SMRP1Q8NCR6 262 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 LEO1Q8WVC0 666 aaPredicted RBP11.11□□□□□ -0.63
CD40-204ENST00000466205 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 RPGRIP1Q96KN7 1286 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 TNMDQ9H2S6 317 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 SF3B1O75533 1304 aaKnown RBP eCLIP11.1□□□□□ -0.63
CD40-204ENST00000466205 LACTBL1A8MY62 500 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 LILRB3O75022 631 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 EFEMP2O95967 443 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 GAP43P17677 238 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 CLCN4P51793 760 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 DSG1Q02413 1049 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 ZP2Q05996 745 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 ENOX2Q16206 610 aaKnown RBP11.1□□□□□ -0.63
CD40-204ENST00000466205 UPP1Q16831 310 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 CD300LGQ6UXG3 332 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 TMC5Q6UXY8 1006 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 GJD3Q8N144 294 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 ZSWIM2Q8NEG5 633 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 SLC22A17Q8WUG5 538 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 POMGNT1Q8WZA1 660 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 S1PR5Q9H228 398 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
CD40-204ENST00000466205 MAN1C1Q9NR34 630 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 KCNH3Q9ULD8 1083 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
CD40-204ENST00000466205 A0A0B4J269 797 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 FRMD3A2A2Y4 597 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 GOLGA8IPA6NC78 632 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 GOLGA8JA6NMD2 632 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 OGTO15294 1046 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 PPP1R37O75864 691 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 PIGRP01833 764 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 CLTAP09496 248 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 PFKFB1P16118 471 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
CD40-204ENST00000466205 CUL4BQ13620 913 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 L1TD1Q5T7N2 865 aaKnown RBP11.09□□□□□ -0.63
CD40-204ENST00000466205 TMEM184AQ6ZMB5 413 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 CEP57L1Q8IYX8 460 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 FBXL18Q96ME1 805 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 UROC1Q96N76 676 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 ACCSQ96QU6 501 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 KBTBD4Q9NVX7 518 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 SSX2IPQ9Y2D8 614 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
CD40-204ENST00000466205 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 FSD2A1L4K1 749 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ADAM12O43184 909 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 TGM5O43548 720 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 FAM189A1O60320 539 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 RFPL2O75678 378 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 GLUD1P00367 558 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ADH1AP07327 375 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 NFICP08651 508 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 KCNE1P15382 129 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ADSSP30520 456 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 MCM4P33991 863 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ARPP19P56211 112 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 AMPD3Q01432 767 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 CBX2Q14781 532 aaPredicted RBP11.08□□□□□ -0.64
CD40-204ENST00000466205 PSMD5Q16401 504 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ADHFE1Q8IWW8 467 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 NELFCDQ8IXH7 590 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms