RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SENP6Q9GZR1 1112 aaPredicted RBP7.1□□□□□ -1.27
SMC4-205ENST00000465563 RSAD1Q9HA92 442 aa7.1□□□□□ -1.27
SMC4-205ENST00000465563 LANCL2Q9NS86 450 aa7.1□□□□□ -1.27
SMC4-205ENST00000465563 FAM30AQ9NZY2 134 aa7.1□□□□□ -1.27
SMC4-205ENST00000465563 GUCY1A2P33402 732 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SMC4-205ENST00000465563 UBXN2BQ14CS0 331 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 FAM43AQ8N2R8 423 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 HOXB13Q92826 284 aaPredicted RBP7.09□□□□□ -1.27
SMC4-205ENST00000465563 FUBP1Q96AE4 644 aaKnown RBP7.09□□□□□ -1.27
SMC4-205ENST00000465563 BOD1Q96IK1 185 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 Q96MF0 132 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 SLKQ9H2G2 1235 aaPredicted RBP7.09□□□□□ -1.27
SMC4-205ENST00000465563 TBX22Q9Y458 520 aa7.09□□□□□ -1.27
SMC4-205ENST00000465563 ZNF37AP17032 561 aaPredicted RBP7.08□□□□□ -1.28
SMC4-205ENST00000465563 GCSHP23434 173 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 PTH2RP49190 550 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 PPP3CAQ08209 521 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 FAPQ12884 760 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 TOR2AQ5JU69 321 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 OTUD7BQ6GQQ9 843 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 ADI1Q9BV57 179 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 LDAHQ9H6V9 325 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 GALNT9Q9HCQ5 603 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 DMRT3Q9NQL9 472 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 TMEM74BQ9NUR3 256 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 TBCCD1Q9NVR7 557 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 TLK1Q9UKI8 766 aa7.08□□□□□ -1.28
SMC4-205ENST00000465563 ENDOD1O94919 500 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 FGFR4P22455 802 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 ALDH1A3P47895 512 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 CXADRP78310 365 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 MALLQ13021 153 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 NOMO1Q15155 1222 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 COLEC12Q5KU26 742 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 ZNF529Q6P280 563 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 BOLLQ8N9W6 283 aaKnown RBP7.07□□□□□ -1.28
SMC4-205ENST00000465563 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 CASKIN2Q8WXE0 1202 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 ALG13Q9NP73 1137 aaKnown RBP7.07□□□□□ -1.28
SMC4-205ENST00000465563 VTA1Q9NP79 307 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 TMEM140Q9NV12 185 aa7.07□□□□□ -1.28
SMC4-205ENST00000465563 AJAP1Q9UKB5 411 aaPredicted RBP7.07□□□□□ -1.28
SMC4-205ENST00000465563 SALL3Q9BXA9 1300 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 TEX33O43247 280 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 GPANK1O95872 356 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 GSPT1P15170 499 aaKnown RBP7.06□□□□□ -1.28
SMC4-205ENST00000465563 MCAMP43121 646 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
SMC4-205ENST00000465563 ZNF169Q14929 603 aaPredicted RBP7.06□□□□□ -1.28
SMC4-205ENST00000465563 ZKSCAN2Q63HK3 967 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 FOXR2Q6PJQ5 311 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 Q6ZNX1 250 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 FAM98AQ8NCA5 519 aaKnown RBP7.06□□□□□ -1.28
SMC4-205ENST00000465563 DUSP26Q9BV47 211 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 CASS4Q9NQ75 786 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 KCNE5Q9UJ90 142 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 SIK3Q9Y2K2 1263 aa7.06□□□□□ -1.28
SMC4-205ENST00000465563 SLC5A3P53794 718 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 HSD11B2P80365 405 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 STAT4Q14765 748 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 CT47A1Q5JQC4 288 aaPredicted RBP7.05□□□□□ -1.28
SMC4-205ENST00000465563 SEM1Q6ZVN7 128 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 CYFIP2Q96F07 1278 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 KIAA1586Q9HCI6 787 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 C14orf119Q9NWQ9 140 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 DNAJC28Q9NX36 388 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 SLC23A1Q9UHI7 598 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 AATKQ6ZMQ8 1374 aa7.05□□□□□ -1.28
SMC4-205ENST00000465563 COL11A2P13942 1736 aaPredicted RBP7.04□□□□□ -1.28
SMC4-205ENST00000465563 FPR1P21462 350 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 SLC6A2P23975 617 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 TMPRSS15P98073 1019 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 AFAP1L2Q8N4X5 818 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 AHCYL2Q96HN2 611 aaKnown RBP7.04□□□□□ -1.28
SMC4-205ENST00000465563 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 SPATA5L1Q9BVQ7 753 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 FBXO34Q9NWN3 711 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 MTO1Q9Y2Z2 717 aaKnown RBP7.04□□□□□ -1.28
SMC4-205ENST00000465563 ACTL7AQ9Y615 435 aa7.04□□□□□ -1.28
SMC4-205ENST00000465563 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 PRSS23O95084 383 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 C1RP00736 705 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 CKBP12277 381 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 ALAS1P13196 640 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 CPEP16870 476 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 GPR3P46089 330 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 RARRES1P49788 294 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 SIM1P81133 766 aaPredicted RBP7.03□□□□□ -1.28
SMC4-205ENST00000465563 MGAT2Q10469 447 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 HNRNPA0Q13151 305 aaKnown RBP7.03□□□□□ -1.28
SMC4-205ENST00000465563 UBE3BQ7Z3V4 1068 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMC4-205ENST00000465563 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 MYOCQ99972 504 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 LRIT1Q9P2V4 623 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 USP25Q9UHP3 1055 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 DMTF1Q9Y222 760 aa7.03□□□□□ -1.28
SMC4-205ENST00000465563 TLDC2A0PJX2 215 aa7.02□□□□□ -1.29
SMC4-205ENST00000465563 PCSK1P29120 753 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms