RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 CACNA1HO95180 2353 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 A0A1B0GUA9 196 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 K7ENM7 598 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 N4BP3O15049 544 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 ZNF202O95125 648 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 MAPTP10636 758 aaKnown RBP19.39■□□□□ 0.69
COL7A1-205ENST00000465238 ABCD1P33897 745 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 MRE11P49959 708 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 SCNN1GP51170 649 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 PTPN5P54829 565 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 ASIC1P78348 528 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 IER5LQ5T953 404 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 SFR1Q86XK3 245 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 PRSS33Q8NF86 280 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 CCDC34Q96HJ3 373 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 RPS6KC1Q96S38 1066 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 APOL6Q9BWW8 343 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 NXF3Q9H4D5 531 aaKnown RBP19.39■□□□□ 0.69
COL7A1-205ENST00000465238 ZMYM2Q9UBW7 1377 aa19.39■□□□□ 0.69
COL7A1-205ENST00000465238 C2CD2LO14523 706 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 EFEMP2O95967 443 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 ADH1AP07327 375 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 NMT1P30419 496 aaKnown RBP19.38■□□□□ 0.69
COL7A1-205ENST00000465238 GLUD2P49448 558 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 CNNM4Q6P4Q7 775 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 ELMSAN1Q6PJG2 1045 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 C15orf39Q6ZRI6 1047 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 RNF168Q8IYW5 571 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-205ENST00000465238 PAGE5Q96GU1 130 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 COLEC11Q9BWP8 271 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 MRPL4Q9BYD3 311 aaKnown RBP19.38■□□□□ 0.69
COL7A1-205ENST00000465238 BLZF1Q9H2G9 400 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 MRPL44Q9H9J2 332 aaKnown RBP19.38■□□□□ 0.69
COL7A1-205ENST00000465238 MIOSQ9NXC5 875 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 USP20Q9Y2K6 914 aa19.38■□□□□ 0.69
COL7A1-205ENST00000465238 NPTXRO95502 500 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 NT5DC1Q5TFE4 455 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 ATF7IP2Q5U623 682 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 KRBA2Q6ZNG9 492 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 TAS1R3Q7RTX0 852 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-205ENST00000465238 CDR2LQ86X02 465 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-205ENST00000465238 GRAMD1CQ8IYS0 662 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-205ENST00000465238 ADPGKQ9BRR6 497 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 TBC1D7Q9P0N9 293 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
COL7A1-205ENST00000465238 FRMD3A2A2Y4 597 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 TTLL13PA6NNM8 815 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 TEX28O15482 410 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 AKAP5P24588 427 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 CASP1P29466 404 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 AVPR2P30518 371 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 DSG1Q02413 1049 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 GRIK3Q13003 919 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 KIAA0319Q5VV43 1072 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 OTOP3Q7RTS5 596 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 TAS1R1Q7RTX1 841 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 ZNF720Q7Z2F6 126 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 FMR1NBQ8N0W7 255 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-205ENST00000465238 GSTCDQ8NEC7 633 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 CMASQ8NFW8 434 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-205ENST00000465238 ACO2Q99798 780 aaKnown RBP19.36■□□□□ 0.69
COL7A1-205ENST00000465238 TARS2Q9BW92 718 aaKnown RBP19.36■□□□□ 0.69
COL7A1-205ENST00000465238 ST6GALNAC4Q9H4F1 302 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 PDZD7Q9H5P4 517 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 RXFP1Q9HBX9 757 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 OLFML3Q9NRN5 406 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 LIMD1Q9UGP4 676 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 TBX20Q9UMR3 447 aa19.36■□□□□ 0.69
COL7A1-205ENST00000465238 PVALEFA0A1B0GWK0 134 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 GADD45BO75293 160 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-205ENST00000465238 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
COL7A1-205ENST00000465238 EDN1P05305 212 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 MYL1P05976 194 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 ASGR2P07307 311 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 NUBP1P53384 320 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 VCPP55072 806 aaKnown RBP19.35■□□□□ 0.69
COL7A1-205ENST00000465238 GTF2BQ00403 316 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 CUL4BQ13620 913 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 ZC2HC1CQ53FD0 456 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-205ENST00000465238 CYP26C1Q6V0L0 522 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 UNC13DQ70J99 1090 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 GPR65Q8IYL9 337 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 KCNN1Q92952 543 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 BICD1Q96G01 975 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 GBP4Q96PP9 640 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 FIZ1Q96SL8 496 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 TCHPQ9BT92 498 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 MAN1C1Q9NR34 630 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 CHST7Q9NS84 486 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 PARP2Q9UGN5 583 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 TNFSF13BQ9Y275 285 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 PCDHB13Q9Y5F0 798 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 PLXNA3P51805 1871 aa19.35■□□□□ 0.69
COL7A1-205ENST00000465238 GCNT3O95395 438 aa19.34■□□□□ 0.69
COL7A1-205ENST00000465238 GLUD1P00367 558 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms