RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NOTUMQ6P988 496 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 C12orf76Q8N812 135 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-209ENST00000465132 BSNDQ8WZ55 320 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 RIPOR3Q96MK2 946 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 ADPGKQ9BRR6 497 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 FZD8Q9H461 694 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 AGPAT5Q9NUQ2 364 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 CGNQ9P2M7 1197 aaKnown RBP19.06■□□□□ 0.64
CPSF4-209ENST00000465132 TBX20Q9UMR3 447 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 ZDBF2Q9HCK1 2354 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 KLRC4O43908 158 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 WEE2P0C1S8 567 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 AVPR2P30518 371 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 SLC11A1P49279 550 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 EHHADHQ08426 723 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 RARS2Q5T160 578 aaKnown RBP19.05■□□□□ 0.64
CPSF4-209ENST00000465132 ZNF658Q5TYW1 1059 aaPredicted RBP19.05■□□□□ 0.64
CPSF4-209ENST00000465132 ZPBP2Q6X784 338 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 HACE1Q8IYU2 909 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 SYCP3Q8IZU3 236 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 GOLGA5Q8TBA6 731 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 SLC22A17Q8WUG5 538 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 PGBD4Q96DM1 585 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 BICD1Q96G01 975 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 POLD4Q9HCU8 107 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 DNAJB4Q9UDY4 337 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 DACH1Q9UI36 760 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 SORCS3Q9UPU3 1222 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 PCDHB2Q9Y5E7 798 aa19.05■□□□□ 0.64
CPSF4-209ENST00000465132 CNTNAP2Q9UHC6 1331 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 N4BP3O15049 544 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 B4GALT3O60512 393 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 PDGFBP01127 241 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-209ENST00000465132 PRR29P0C7W0 189 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 EPCAMP16422 314 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 MTMR3Q13615 1198 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 KYAT1Q16773 422 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 L1TD1Q5T7N2 865 aaKnown RBP19.04■□□□□ 0.64
CPSF4-209ENST00000465132 SLFN12LQ6IEE8 588 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 KIAA1841Q6NSI8 718 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 SASS6Q6UVJ0 657 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 AGMOQ6ZNB7 445 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 MRPL10Q7Z7H8 261 aaKnown RBP19.04■□□□□ 0.64
CPSF4-209ENST00000465132 ZNF280BQ86YH2 543 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 UBALD2Q8IYN6 164 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 KMT2EQ8IZD2 1858 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 VN1R3Q9BXE9 311 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 GBP3Q9H0R5 595 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 MINDY3Q9H8M7 445 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 TBC1D7Q9P0N9 293 aa19.04■□□□□ 0.64
CPSF4-209ENST00000465132 HNRNPDLO14979 420 aaKnown RBP19.03■□□□□ 0.64
CPSF4-209ENST00000465132 CASP1P29466 404 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 NMT1P30419 496 aaKnown RBP19.03■□□□□ 0.64
CPSF4-209ENST00000465132 LIG4P49917 911 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 PTPN14Q15678 1187 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 COBLL1Q53SF7 1204 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 ATAT1Q5SQI0 421 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 HS2ST1Q7LGA3 356 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 ZNF507Q8TCN5 953 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 URGCPQ8TCY9 931 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 ANP32EQ9BTT0 268 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 CCDC113Q9H0I3 377 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 SLC39A2Q9NP94 309 aa19.03■□□□□ 0.64
CPSF4-209ENST00000465132 KIAA0391O15091 583 aaKnown RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 HOXA11P31270 313 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 AFF1P51825 1210 aaKnown RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 DCAF4L1Q3SXM0 396 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 CT47A1Q5JQC4 288 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 UBXN11Q5T124 520 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 ATF7IP2Q5U623 682 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 CAVIN1Q6NZI2 390 aaKnown RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 SLC27A1Q6PCB7 646 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 PPFIBP1Q86W92 1011 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 ZDHHC14Q8IZN3 488 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 GUF1Q8N442 669 aaKnown RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 TDRD5Q8NAT2 981 aaKnown RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 TCHPQ9BT92 498 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 KIFC3Q9BVG8 833 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 TRIM6Q9C030 488 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-209ENST00000465132 RSAD1Q9HA92 442 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 STK39Q9UEW8 545 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 TNFSF13BQ9Y275 285 aa19.02■□□□□ 0.64
CPSF4-209ENST00000465132 A0A1B0GUA9 196 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 PSMA7O14818 248 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 TSPAN1O60635 241 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 TOM1L1O75674 476 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 DDHD2O94830 711 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 PIGRP01833 764 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 BMT2Q1RMZ1 405 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 MLKLQ8NB16 471 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 FIZ1Q96SL8 496 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 STRA6Q9BX79 667 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 KANSL3Q9P2N6 904 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 USTQ9Y2C2 406 aa19.01■□□□□ 0.63
CPSF4-209ENST00000465132 CLDN3O15551 220 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 PPP1R37O75864 691 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 ALDH2P05091 517 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 ASGR2P07307 311 aa19■□□□□ 0.63
CPSF4-209ENST00000465132 MATR3P43243 847 aaKnown RBP eCLIP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms