RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 RTP2Q5QGT7 225 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 ATAT1Q5SQI0 421 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 DCLRE1AQ6PJP8 1040 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 RNF135Q8IUD6 432 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 NOC3LQ8WTT2 800 aaKnown RBP13.31□□□□□ -0.28
XRN1-204ENST00000465074 DHX58Q96C10 678 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 RIPOR3Q96MK2 946 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 ZMAT2Q96NC0 199 aaKnown RBP13.31□□□□□ -0.28
XRN1-204ENST00000465074 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 MSTO1Q9BUK6 570 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 HAPLN2Q9GZV7 340 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 ADAM7Q9H2U9 754 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 SLC38A7Q9NVC3 462 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 TISP43B9A030 160 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 GCNT3O95395 438 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 YEATS4O95619 227 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 CLTAP09496 248 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 MTHFRP42898 656 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 BRCC3P46736 316 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
XRN1-204ENST00000465074 ITIH3Q06033 890 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 MCL1Q07820 350 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
XRN1-204ENST00000465074 PSMD5Q16401 504 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 SLC10A6Q3KNW5 377 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 ZBTB41Q5SVQ8 909 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 ELMSAN1Q6PJG2 1045 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 ALKAL1Q6UXT8 129 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 SUSD6Q92537 303 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 UROC1Q96N76 676 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 C1QTNF1Q9BXJ1 281 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 IKZF4Q9H2S9 585 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 POMKQ9H5K3 350 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 RPF1Q9H9Y2 349 aaKnown RBP13.3□□□□□ -0.28
XRN1-204ENST00000465074 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 NUB1Q9Y5A7 615 aa13.3□□□□□ -0.28
XRN1-204ENST00000465074 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
XRN1-204ENST00000465074 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 PODXLO00592 558 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 OGTO15294 1046 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 DCXO43602 365 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 TRAPPC3O43617 180 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 BRD1O95696 1058 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 EFEMP2O95967 443 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 ALADP13716 330 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 GAP43P17677 238 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 ACOT2P49753 483 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 GTF2BQ00403 316 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 PPP2R3AQ06190 1150 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 UPP1Q16831 310 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 SHC4Q6S5L8 630 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
XRN1-204ENST00000465074 SYCP3Q8IZU3 236 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 TMEM130Q8N3G9 435 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 KCNG4Q8TDN1 519 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
XRN1-204ENST00000465074 CHAMP1Q96JM3 812 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 SFXN1Q9H9B4 322 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 RXFP1Q9HBX9 757 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
XRN1-204ENST00000465074 CNTN3Q9P232 1028 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 TUBGCP4Q9UGJ1 667 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 NR2E1Q9Y466 385 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 MUC3AQ02505 3323 aa13.29□□□□□ -0.28
XRN1-204ENST00000465074 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 LOC730098B7Z3J9 87 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
XRN1-204ENST00000465074 MEFVO15553 781 aaPredicted RBP13.28□□□□□ -0.28
XRN1-204ENST00000465074 TGM5O43548 720 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 RFPL2O75678 378 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 KCNE1P15382 129 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 SCP2P22307 547 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
XRN1-204ENST00000465074 ABCD1P33897 745 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 ARPP19P56211 112 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 CREMQ03060 361 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 XKR4Q5GH76 650 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 CCDC65Q8IXS2 484 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 NECTIN4Q96NY8 510 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 FNIP2Q9P278 1114 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 DPP7Q9UHL4 492 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
XRN1-204ENST00000465074 C2orf16Q68DN1 1984 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms