RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 EDEM2Q9BV94 578 aa10.57□□□□□ -0.72
APP-213ENST00000464867 TRMT61BQ9BVS5 477 aaKnown RBP10.57□□□□□ -0.72
APP-213ENST00000464867 COLEC11Q9BWP8 271 aa10.57□□□□□ -0.72
APP-213ENST00000464867 RSAD1Q9HA92 442 aa10.57□□□□□ -0.72
APP-213ENST00000464867 GDE1Q9NZC3 331 aa10.57□□□□□ -0.72
APP-213ENST00000464867 MSRB2Q9Y3D2 182 aa10.57□□□□□ -0.72
APP-213ENST00000464867 MRPS23Q9Y3D9 190 aaKnown RBP10.57□□□□□ -0.72
APP-213ENST00000464867 PCDHB2Q9Y5E7 798 aa10.57□□□□□ -0.72
APP-213ENST00000464867 LAMA1P25391 3075 aa10.56□□□□□ -0.72
APP-213ENST00000464867 MEIS3P2A8K0S8 358 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CCL16O15467 120 aa10.56□□□□□ -0.72
APP-213ENST00000464867 B4GALT3O60512 393 aa10.56□□□□□ -0.72
APP-213ENST00000464867 LILRA1O75019 489 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CSDE1O75534 798 aaKnown RBP10.56□□□□□ -0.72
APP-213ENST00000464867 CCNE2O96020 404 aa10.56□□□□□ -0.72
APP-213ENST00000464867 C8AP07357 584 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CHRNB1P11230 501 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CSRP1P21291 193 aaKnown RBP10.56□□□□□ -0.72
APP-213ENST00000464867 HOXA6P31267 233 aa10.56□□□□□ -0.72
APP-213ENST00000464867 HOXA9P31269 272 aa10.56□□□□□ -0.72
APP-213ENST00000464867 ADD1P35611 737 aaKnown RBP10.56□□□□□ -0.72
APP-213ENST00000464867 ZNF76P36508 570 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
APP-213ENST00000464867 RAP1GAPP47736 663 aa10.56□□□□□ -0.72
APP-213ENST00000464867 TRDNQ13061 729 aa10.56□□□□□ -0.72
APP-213ENST00000464867 SEC23AQ15436 765 aa10.56□□□□□ -0.72
APP-213ENST00000464867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.56□□□□□ -0.725e-8■□□□□ 10.7
APP-213ENST00000464867 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
APP-213ENST00000464867 C1orf228Q6PIY5 440 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
APP-213ENST00000464867 PROSER1Q86XN7 944 aa10.56□□□□□ -0.72
APP-213ENST00000464867 GAB3Q8WWW8 586 aa10.56□□□□□ -0.72
APP-213ENST00000464867 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
APP-213ENST00000464867 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
APP-213ENST00000464867 UBN1Q9NPG3 1134 aa10.56□□□□□ -0.72
APP-213ENST00000464867 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
APP-213ENST00000464867 NRBP2Q9NSY0 501 aa10.56□□□□□ -0.72
APP-213ENST00000464867 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
APP-213ENST00000464867 PIAS3Q9Y6X2 628 aa10.56□□□□□ -0.72
APP-213ENST00000464867 LOC400499M0QZD8 3231 aa10.56□□□□□ -0.72
APP-213ENST00000464867 UNC79Q9P2D8 2635 aa10.55□□□□□ -0.72
APP-213ENST00000464867 K7ESF4 209 aa10.55□□□□□ -0.72
APP-213ENST00000464867 PSAPP07602 524 aa10.55□□□□□ -0.72
APP-213ENST00000464867 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
APP-213ENST00000464867 ATP4AP20648 1035 aa10.55□□□□□ -0.72
APP-213ENST00000464867 DNM2P50570 870 aa10.55□□□□□ -0.72
APP-213ENST00000464867 PTSQ03393 145 aa10.55□□□□□ -0.72
APP-213ENST00000464867 SART3Q15020 963 aaKnown RBP10.55□□□□□ -0.72
APP-213ENST00000464867 UBE2SQ16763 222 aa10.55□□□□□ -0.72
APP-213ENST00000464867 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
APP-213ENST00000464867 KIAA1211LQ6NV74 962 aa10.55□□□□□ -0.72
APP-213ENST00000464867 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
APP-213ENST00000464867 RNF168Q8IYW5 571 aaPredicted RBP10.55□□□□□ -0.72
APP-213ENST00000464867 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
APP-213ENST00000464867 OTUD7AQ8TE49 926 aaPredicted RBP10.55□□□□□ -0.72
APP-213ENST00000464867 ING5Q8WYH8 240 aa10.55□□□□□ -0.72
APP-213ENST00000464867 MBOAT7Q96N66 472 aa10.55□□□□□ -0.72
APP-213ENST00000464867 INSM2Q96T92 566 aaPredicted RBP10.55□□□□□ -0.72
APP-213ENST00000464867 PLA2G2FQ9BZM2 168 aa10.55□□□□□ -0.72
APP-213ENST00000464867 SMOC1Q9H4F8 434 aa10.55□□□□□ -0.72
APP-213ENST00000464867 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
APP-213ENST00000464867 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
APP-213ENST00000464867 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
APP-213ENST00000464867 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
APP-213ENST00000464867 TDRD15B5MCY1 1934 aaKnown RBP10.54□□□□□ -0.72
APP-213ENST00000464867 TICRRQ7Z2Z1 1910 aa10.54□□□□□ -0.72
APP-213ENST00000464867 LAMA5O15230 3695 aa10.54□□□□□ -0.72
APP-213ENST00000464867 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
APP-213ENST00000464867 IFIT3O14879 490 aaKnown RBP10.54□□□□□ -0.72
APP-213ENST00000464867 HYAL3O43820 417 aaPredicted RBP10.54□□□□□ -0.72
APP-213ENST00000464867 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
APP-213ENST00000464867 CCNE1P24864 410 aa10.54□□□□□ -0.72
APP-213ENST00000464867 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
APP-213ENST00000464867 GRM2Q14416 872 aa10.54□□□□□ -0.72
APP-213ENST00000464867 DGKKQ5KSL6 1271 aa10.54□□□□□ -0.72
APP-213ENST00000464867 TANGO2Q6ICL3 276 aa10.54□□□□□ -0.72
APP-213ENST00000464867 AGMOQ6ZNB7 445 aa10.54□□□□□ -0.72
APP-213ENST00000464867 KBTBD6Q86V97 674 aa10.54□□□□□ -0.72
APP-213ENST00000464867 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
APP-213ENST00000464867 COLGALT2Q8IYK4 626 aa10.54□□□□□ -0.72
APP-213ENST00000464867 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
APP-213ENST00000464867 CTCFLQ8NI51 663 aaPredicted RBP10.54□□□□□ -0.72
APP-213ENST00000464867 FAM200AQ8TCP9 573 aa10.54□□□□□ -0.72
APP-213ENST00000464867 MSANTD3Q96H12 275 aa10.54□□□□□ -0.72
APP-213ENST00000464867 B3GALT6Q96L58 329 aa10.54□□□□□ -0.72
APP-213ENST00000464867 LZTS2Q9BRK4 669 aa10.54□□□□□ -0.72
APP-213ENST00000464867 APOL6Q9BWW8 343 aa10.54□□□□□ -0.72
APP-213ENST00000464867 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
APP-213ENST00000464867 SLC32A1Q9H598 525 aa10.54□□□□□ -0.72
APP-213ENST00000464867 ZNF395Q9H8N7 513 aaPredicted RBP10.54□□□□□ -0.72
APP-213ENST00000464867 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
APP-213ENST00000464867 TRPV5Q9NQA5 729 aa10.54□□□□□ -0.72
APP-213ENST00000464867 GABBR1Q9UBS5 961 aa10.54□□□□□ -0.72
APP-213ENST00000464867 PCDHA10Q9Y5I2 948 aa10.54□□□□□ -0.72
APP-213ENST00000464867 A0A087WZ62 844 aa10.53□□□□□ -0.72
APP-213ENST00000464867 MEIS1O00470 390 aa10.53□□□□□ -0.72
APP-213ENST00000464867 TADA2AO75478 443 aa10.53□□□□□ -0.72
APP-213ENST00000464867 AKAP3O75969 853 aa10.53□□□□□ -0.72
APP-213ENST00000464867 GDI1P31150 447 aa10.53□□□□□ -0.72
APP-213ENST00000464867 FGD1P98174 961 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms