RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 TMEM59LQ9UK28 342 aa10.57□□□□□ -0.72
ATF3-207ENST00000464547 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
ATF3-207ENST00000464547 MCM3APO60318 1980 aa10.57□□□□□ -0.72
ATF3-207ENST00000464547 PLXNA1Q9UIW2 1896 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.56□□□□□ -0.72
ATF3-207ENST00000464547 MAGEB2O15479 319 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 PHACTR2O75167 634 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 CAPN15O75808 1086 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 CLTAP09496 248 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 SMPD1P17405 629 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 IGBP1P78318 339 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 CUL2Q13617 745 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 SURF1Q15526 300 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 CLEC16AQ2KHT3 1053 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 GLE1Q53GS7 698 aaKnown RBP10.56□□□□□ -0.72
ATF3-207ENST00000464547 ATF7IP2Q5U623 682 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 SCARA3Q6AZY7 606 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 ACAD10Q6JQN1 1059 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 DPP9Q86TI2 863 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 WDR49Q8IV35 697 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 RASGEF1CQ8N431 466 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 NPLOC4Q8TAT6 608 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 MAML3Q96JK9 1138 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 NLRP4Q96MN2 994 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 CTTNBP2NLQ9P2B4 639 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
ATF3-207ENST00000464547 CPSF3Q9UKF6 684 aaKnown RBP10.56□□□□□ -0.72
ATF3-207ENST00000464547 NUB1Q9Y5A7 615 aa10.56□□□□□ -0.72
ATF3-207ENST00000464547 COL1A2P08123 1366 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 INO80B-WBP1J3KQ70 363 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 B4GALT5O43286 388 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 ZNF286BP0CG31 522 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 MYBL2P10244 700 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 MAPK4P31152 587 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 BPIFB4P59827 614 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 TNNC1P63316 161 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 SLC7A5Q01650 507 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 NCOA4Q13772 614 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 CASP8Q14790 479 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 C11orf63Q6NUN7 778 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 ZNF677Q86XU0 584 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 GSPT2Q8IYD1 628 aaKnown RBP10.55□□□□□ -0.72
ATF3-207ENST00000464547 MSL3Q8N5Y2 521 aaKnown RBP10.55□□□□□ -0.72
ATF3-207ENST00000464547 UBR7Q8N806 425 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 AENQ8WTP8 325 aaKnown RBP10.55□□□□□ -0.72
ATF3-207ENST00000464547 KRT12Q99456 494 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 HINFPQ9BQA5 517 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.729e-6■■■■■ 27.7
ATF3-207ENST00000464547 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 NFKBIZQ9BYH8 718 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
ATF3-207ENST00000464547 MINDY3Q9H8M7 445 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 NOC2LQ9Y3T9 749 aaKnown RBP10.55□□□□□ -0.72
ATF3-207ENST00000464547 PCDHB4Q9Y5E5 795 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 UMODL1Q5DID0 1318 aa10.55□□□□□ -0.72
ATF3-207ENST00000464547 PGRMC1O00264 195 aaKnown RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 CYP1A1P04798 512 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 HOXC6P09630 235 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 IQCF3P0C7M6 154 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 TBXAS1P24557 533 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 TNFRSF8P28908 595 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 PHKA2P46019 1235 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 NOP14P78316 857 aaKnown RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 POU5F1BQ06416 359 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 ACVR2BQ13705 512 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 DUSP28Q4G0W2 176 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 CST9Q5W186 159 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 MTHFD1LQ6UB35 978 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 FAM212AQ96EL1 285 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 RPS6KC1Q96S38 1066 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 NUP85Q9BW27 656 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 CDT1Q9H211 546 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 GDF3Q9NR23 364 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 ST7Q9NRC1 585 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 STIM2Q9P246 746 aa10.54□□□□□ -0.72
ATF3-207ENST00000464547 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
ATF3-207ENST00000464547 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms