RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 USTQ9Y2C2 406 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 DOCK6Q96HP0 2047 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 H0YCG3 227 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 TMEM189-UBE2V1I3L0A0 370 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 TRIOO75962 3097 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 BRD1O95696 1058 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 BRCC3P46736 316 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 MTMR3Q13615 1198 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 UPP1Q16831 310 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 DCLRE1AQ6PJP8 1040 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 ALKAL1Q6UXT8 129 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 USP49Q70CQ1 688 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 ZDHHC14Q8IZN3 488 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 C3orf58Q8NDZ4 430 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 INTS4Q96HW7 963 aaKnown RBP21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 MFSD14AQ96MC6 490 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 CLSTN3Q9BQT9 956 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 PLEKHA4Q9H4M7 779 aa21.08■□□□□ 0.97
CCHCR1-210ENST00000464012 CLUHO75153 1309 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 PODXLO00592 558 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 CLDN3O15551 220 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 TBCAO75347 108 aaKnown RBP21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 TKTP29401 623 aaKnown RBP21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 XKR4Q5GH76 650 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 LILRA6Q6PI73 481 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 ZPBP2Q6X784 338 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 OTOP3Q7RTS5 596 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 PLCD3Q8N3E9 789 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 HDAC7Q8WUI4 952 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 C18orf25Q96B23 403 aaPredicted RBP21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 CLIC6Q96NY7 704 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 CCSER1Q9C0I3 900 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 SLC38A7Q9NVC3 462 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 CNTN3Q9P232 1028 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 FBXO2Q9UK22 296 aaPredicted RBP21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 MTMR6Q9Y217 621 aa21.07■□□□□ 0.96
CCHCR1-210ENST00000464012 DOCK8Q8NF50 2099 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ZNF318Q5VUA4 2279 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 MEFVO15553 781 aaPredicted RBP21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ADAM12O43184 909 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 CXCL8P10145 99 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 FGFR3P22607 806 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 LIG4P49917 911 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 MCL1Q07820 350 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 PDXDC1Q6P996 788 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 CD300LGQ6UXG3 332 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 SUGP1Q8IWZ8 645 aaKnown RBP21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ZNF707Q96C28 371 aaPredicted RBP21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ASIC4Q96FT7 647 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 HAPLN2Q9GZV7 340 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ZDHHC7Q9NXF8 308 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 FBXW11Q9UKB1 542 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 ANK1P16157 1881 aa21.06■□□□□ 0.96
CCHCR1-210ENST00000464012 HNRNPDLO14979 420 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 TRAPPC3O43617 180 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 TRAK2O60296 914 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 KCNE1P15382 129 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 SLC10A6Q3KNW5 377 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 LIN9Q5TKA1 542 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 BMP8AQ7Z5Y6 402 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 DDX27Q96GQ7 796 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 USP28Q96RU2 1077 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 WDR6Q9NNW5 1121 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 TBX20Q9UMR3 447 aa21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 ARIH1Q9Y4X5 557 aaPredicted RBP21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 SRPRBQ9Y5M8 271 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-210ENST00000464012 STX6O43752 255 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 N4BP1O75113 896 aaKnown RBP21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 ZMYND10O75800 440 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 NMT1P30419 496 aaKnown RBP21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 OR1D2P34982 312 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 TXLNAP40222 546 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 TNFSF9P41273 254 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 ZNF131P52739 623 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 SPAG1Q07617 926 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 CYP26C1Q6V0L0 522 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 GET4Q7L5D6 327 aaPredicted RBP21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 DYMQ7RTS9 669 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 TMEM130Q8N3G9 435 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 STAMQ92783 540 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 PRKD2Q9BZL6 878 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 MTRRQ9UBK8 725 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 CCDC39Q9UFE4 941 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 TUBGCP4Q9UGJ1 667 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 NUB1Q9Y5A7 615 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 CDY1Q9Y6F8 540 aa21.04■□□□□ 0.96
CCHCR1-210ENST00000464012 C1RP00736 705 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 PDGFBP01127 241 aaPredicted RBP21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 C8AP07357 584 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 PPM1LQ5SGD2 360 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 UBALD2Q8IYN6 164 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 FBXL6Q8N531 539 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 KRI1Q8N9T8 703 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 STK17AQ9UEE5 414 aa21.03■□□□□ 0.96
CCHCR1-210ENST00000464012 MCM4P33991 863 aa21.02■□□□□ 0.96
CCHCR1-210ENST00000464012 DDIT3P35638 169 aa21.02■□□□□ 0.96
CCHCR1-210ENST00000464012 ZBTB41Q5SVQ8 909 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms