RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 DOCK8Q8NF50 2099 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 VWA3AA6NCI4 1184 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC16A4O15374 487 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 TOM1L1O75674 476 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 KCNE1P15382 129 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 STRN3Q13033 797 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 ZRSR1Q15695 479 aaKnown RBP15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 UVSSAQ2YD98 709 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 GLRA4Q5JXX5 417 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 ANKS3Q6ZW76 656 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 CEP120Q8N960 986 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 TMEM161BQ8NDZ6 487 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 KCNN1Q92952 543 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 ACAP3Q96P50 834 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 TCHPQ9BT92 498 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 MFSD1Q9H3U5 465 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 MTRRQ9UBK8 725 aa15.74■□□□□ 0.11
SNRNP40-203ENST00000463988 TRIP11Q15643 1979 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 VWA8A3KMH1 1905 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 H0YCG3 227 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 ADAM12O43184 909 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 BMP15O95972 392 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 C8AP07357 584 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 PLA2G4BP0C869 781 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 LAMP2P13473 410 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 SCP2P22307 547 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC12A3P55017 1021 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 PPM1LQ5SGD2 360 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 ZPBP2Q6X784 338 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC44A3Q8N4M1 653 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 TMEM105Q8N8V8 129 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 SNX27Q96L92 541 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 CNTN3Q9P232 1028 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 WNT16Q9UBV4 365 aa15.73■□□□□ 0.11
SNRNP40-203ENST00000463988 SFI1A8K8P3 1242 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 ANHXE9PGG2 379 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 XYLBO75191 536 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 MAPTP10636 758 aaKnown RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 FSHRP23945 695 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 IGFBP6P24592 240 aaPredicted RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 OR1D2P34982 312 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 OSTNP61366 133 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 SOX4Q06945 474 aaPredicted RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 AXDND1Q5T1B0 1012 aaPredicted RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 BRAPQ7Z569 592 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 C3orf58Q8NDZ4 430 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 ZMAT2Q96NC0 199 aaKnown RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 GOLGA2P5Q9HBQ8 144 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 LARSQ9P2J5 1176 aaKnown RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 FBXL21Q9UKT6 434 aa15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.72■□□□□ 0.11
SNRNP40-203ENST00000463988 PODXLO00592 558 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 SYN3O14994 580 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 SRFP11831 508 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 NPR3P17342 541 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 AOC1P19801 751 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 TKTP29401 623 aaKnown RBP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 UBA7P41226 1012 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 MCL1Q07820 350 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 HTR4Q13639 388 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 NOLC1Q14978 699 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 ARSHQ5FYA8 562 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC8B1Q6J4K2 584 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 GET4Q7L5D6 327 aaPredicted RBP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 GRASPQ7Z6J2 395 aaPredicted RBP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 ATOH1Q92858 354 aaPredicted RBP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 CALML4Q96GE6 196 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 PHOX2BQ99453 314 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 PLIN2Q99541 437 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 RTP3Q9BQQ7 232 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 PLEKHA5Q9HAU0 1116 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 CDH7Q9ULB5 785 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 ODF2LQ9ULJ1 636 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 CDY1Q9Y6F8 540 aa15.71■□□□□ 0.11
SNRNP40-203ENST00000463988 RIF1Q5UIP0 2472 aaKnown RBP15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 CLDN3O15551 220 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 NARSO43776 548 aaKnown RBP15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 LONP1P36776 959 aaKnown RBP15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 BRCC3P46736 316 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 NCKAP1LP55160 1127 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 CWF19L1Q69YN2 538 aaKnown RBP15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 RSPO2Q6UXX9 243 aaPredicted RBP15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 SIX5Q8N196 739 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 FLCNQ8NFG4 579 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 SLC7A14Q8TBB6 771 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 CITO14578 2027 aa15.7■□□□□ 0.1
SNRNP40-203ENST00000463988 MYH11P35749 1972 aa15.69■□□□□ 0.1
SNRNP40-203ENST00000463988 DOCK6Q96HP0 2047 aa15.69■□□□□ 0.1
SNRNP40-203ENST00000463988 PROB1E7EW31 1015 aa15.69■□□□□ 0.1
SNRNP40-203ENST00000463988 H0Y858 1186 aa15.69■□□□□ 0.1
SNRNP40-203ENST00000463988 I3L4J1 428 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms