RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 PTGDRQ13258 359 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 RAB33AQ14088 237 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 MCRS1Q96EZ8 462 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 SNX27Q96L92 541 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 TARS2Q9BW92 718 aaKnown RBP13.52□□□□□ -0.25
RPA3-206ENST00000463632 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 MTRRQ9UBK8 725 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 TNFSF13BQ9Y275 285 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 SMIM28A0A1B0GU29 152 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 PP2D1A8MPX8 630 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 E9PMD0 336 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 PODXLO00592 558 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 FGFR3P22607 806 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 CDC25AP30304 524 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 HOXA9P31269 272 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 GRM5P41594 1212 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 NPTX2P47972 431 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 STRN3Q13033 797 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 ZC3H14Q6PJT7 736 aaKnown RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 CEP120Q8N960 986 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 DDX27Q96GQ7 796 aaKnown RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 PLIN2Q99541 437 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 CDT1Q9H211 546 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 SLC2A4RGQ9NR83 387 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 SPATA6Q9NWH7 488 aaPredicted RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 DNMT3BQ9UBC3 853 aaKnown RBP13.51□□□□□ -0.25
RPA3-206ENST00000463632 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
RPA3-206ENST00000463632 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 PHLPP2Q6ZVD8 1323 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 SLC16A4O15374 487 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 LRRN2O75325 713 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 RHOP08100 348 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 MCM4P33991 863 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 PFKPQ01813 784 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 NAB2Q15742 525 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 MLF2Q15773 248 aaPredicted RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 UPP1Q16831 310 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 RSPO2Q6UXX9 243 aaPredicted RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 C1orf210Q8IVY1 113 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 BICD1Q96G01 975 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 ACO2Q99798 780 aaKnown RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 MYO10Q9HD67 2058 aa13.5□□□□□ -0.25
RPA3-206ENST00000463632 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
RPA3-206ENST00000463632 FAM170BA6NMN3 283 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 H7C4K7 107 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
RPA3-206ENST00000463632 ID4P47928 161 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 PDIA5Q14554 519 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
RPA3-206ENST00000463632 NPAS3Q8IXF0 933 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 SEMA4AQ9H3S1 761 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 TMEM134Q9H6X4 195 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
RPA3-206ENST00000463632 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 SP9P0CG40 484 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 MCF2P10911 925 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 PTPN2P17706 415 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 CD72P21854 359 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 SMTNP53814 917 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 ROR1Q01973 937 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 PRKCQQ04759 706 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
RPA3-206ENST00000463632 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 IQCEQ6IPM2 695 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 TPRG1Q6ZUI0 275 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 KIAA2013Q8IYS2 634 aa13.48□□□□□ -0.25
RPA3-206ENST00000463632 C4orf32Q8N8J7 132 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms