RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SEPT3Q9UH03 358 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 SUN2Q9UH99 717 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 GOLGA8CPA6NN73 597 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 CHEK2O96017 543 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 OSBPP22059 807 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 NTRK3Q16288 839 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 SNX30Q5VWJ9 437 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 E2F7Q96AV8 911 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 DACT3Q96B18 629 aaPredicted RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 MED10Q9BTT4 135 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 NPHP3-ACAD11A0A0J9YXS1 232 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 PRDX5P30044 214 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 ROR2Q01974 943 aaKnown RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 CATSPER2Q96P56 530 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 EIF2AK1Q9BQI3 630 aaKnown RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 PACSIN1Q9BY11 444 aa16.67■□□□□ 0.26
SMC4-204ENST00000462787 TRMT5Q32P41 509 aaKnown RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 CDKL3Q8IVW4 592 aaPredicted RBP16.67■□□□□ 0.26
SMC4-204ENST00000462787 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 SNAP23O00161 211 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 PIK3R2O00459 728 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 CDHR1Q96JP9 859 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 C10orf88Q9H8K7 445 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 MRGBPQ9NV56 204 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 FRMPD1Q5SYB0 1578 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 A8MXQ7 604 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 PI4K2BG5E9Z4 385 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 PDE2AO00408 941 aaPredicted RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 SNRPAP09012 282 aaKnown RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 AMPD2Q01433 879 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 SETD3Q86TU7 594 aaPredicted RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 PPP2R3CQ969Q6 453 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 GID8Q9NWU2 228 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 GTSE1Q9NYZ3 720 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 LZTS1Q9Y250 596 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 LIN7AO14910 233 aaPredicted RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 P4HA2O15460 535 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 CPA2P48052 419 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 IZUMO2Q6UXV1 221 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 C3orf62Q6ZUJ4 267 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 MIGA2Q7L4E1 593 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 FAM149B1Q96BN6 582 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
SMC4-204ENST00000462787 GINS2Q9Y248 185 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 UBE4BO95155 1302 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 PTPRMP28827 1452 aa16.66■□□□□ 0.26
SMC4-204ENST00000462787 RSPH10B2B2RC85 870 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 RSPH10BP0C881 870 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 JAK3P52333 1124 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 COPAP53621 1224 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 TRAPPC9Q96Q05 1148 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 RNPEPL1Q9HAU8 725 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 SYNJ2BP-COX16A0A087WUM0 186 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 S100BP04271 92 aaPredicted RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 ITKQ08881 620 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 INPP5AQ14642 412 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 INPP5DQ92835 1189 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 COX16Q9P0S2 106 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 MARCOQ9UEW3 520 aaPredicted RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 HEY1Q9Y5J3 304 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 NPHP4O75161 1426 aaPredicted RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 APOA1P02647 267 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 CCDC117Q8IWD4 279 aaPredicted RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 SLC44A5Q8NCS7 719 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 DDHD1Q8NEL9 900 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 MCPH1Q8NEM0 835 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 REEP2Q9BRK0 252 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 ADAM33Q9BZ11 813 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 K7ERI5 159 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 EIF3DO15371 548 aaKnown RBP eCLIP16.65■□□□□ 0.262e-16■■■■■ 56.2
SMC4-204ENST00000462787 RIPK2O43353 540 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 KRT16P08779 473 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 KRT4P19013 534 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 NLRP11P59045 1033 aaKnown RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 EIF3EP60228 445 aaKnown RBP16.65■□□□□ 0.26
SMC4-204ENST00000462787 CEP55Q53EZ4 464 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 C12orf60Q5U649 245 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 LRRC8EQ6NSJ5 796 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
SMC4-204ENST00000462787 FAM200BP0CF97 657 aa16.64■□□□□ 0.26
SMC4-204ENST00000462787 ATP6V1B1P15313 513 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms