RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 UBE4BO95155 1302 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 TADA2AO75478 443 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 HARSP12081 509 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 TNFSF9P41273 254 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 MRPS5P82675 430 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 DPYDQ12882 1025 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 TMEM174Q8WUU8 243 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 HPS3Q969F9 1004 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 RXFP1Q9HBX9 757 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
HPS1-206ENST00000462743 DERAQ9Y315 318 aa13.16□□□□□ -0.3
HPS1-206ENST00000462743 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 TISP43B9A030 160 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 RHOBTB3O94955 611 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 CXCL8P10145 99 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 LRPAP1P30533 357 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
HPS1-206ENST00000462743 NRIP1P48552 1158 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 DSG1Q02413 1049 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 KCNB1Q14721 858 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 GLRA4Q5JXX5 417 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 UBQLN1Q9UMX0 589 aaKnown RBP13.15□□□□□ -0.3
HPS1-206ENST00000462743 PCDHGC5Q9Y5F6 944 aa13.15□□□□□ -0.3
HPS1-206ENST00000462743 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
HPS1-206ENST00000462743 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 F8W810 466 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 EXTL3O43909 919 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 CLASP2O75122 1294 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 B3GAT3O94766 335 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 BMP1P13497 986 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 PAX3P23760 479 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 ACOT2P49753 483 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 CLCNKBP51801 687 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 STK4Q13043 487 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 SPATA1Q5VX52 437 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 RBM23Q86U06 439 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 C12orf56Q8IXR9 622 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 MSLNLQ96KJ4 702 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.14□□□□□ -0.31
HPS1-206ENST00000462743 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
HPS1-206ENST00000462743 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 C2CD2Q9Y426 696 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 COL6A3P12111 3177 aa13.14□□□□□ -0.31
HPS1-206ENST00000462743 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.31
HPS1-206ENST00000462743 TCF20Q9UGU0 1960 aaKnown RBP13.13□□□□□ -0.31
HPS1-206ENST00000462743 PER2O15055 1255 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 KIF4AO95239 1232 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 IL18RAPO95256 599 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 GLP2RO95838 553 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 FGFR3P22607 806 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 GLUD2P49448 558 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
HPS1-206ENST00000462743 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 BRSK2Q8IWQ3 736 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 KIAA0895Q8NCT3 520 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.13□□□□□ -0.31
HPS1-206ENST00000462743 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
HPS1-206ENST00000462743 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms