RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ASIC1P78348 528 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 KCNA1Q09470 495 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 ALCAMQ13740 583 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 USP41Q3LFD5 358 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 ZBTB41Q5SVQ8 909 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 KIAA0319Q5VV43 1072 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 SMRP1Q8NCR6 262 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 CASP10Q92851 521 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 KLHL5Q96PQ7 755 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 ACCSQ96QU6 501 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 IKZF4Q9H2S9 585 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 PLEKHA5Q9HAU0 1116 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 STYXL1Q9Y6J8 313 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 A0A1B0GVL5 298 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 CNPP09543 421 aaKnown RBP20.54■□□□□ 0.88
COL9A3-203ENST00000462700 PFKFB1P16118 471 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 UPP1Q16831 310 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 SLFN12LQ6IEE8 588 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 KIAA1841Q6NSI8 718 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 ANKRD54Q6NXT1 300 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 CEP57L1Q8IYX8 460 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 B3GALT6Q96L58 329 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 SERTAD1Q9UHV2 236 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 EXOC7Q9UPT5 735 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 HPSEQ9Y251 543 aa20.54■□□□□ 0.88
COL9A3-203ENST00000462700 TTC26A0AVF1 554 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 ACTN4O43707 911 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 B3GAT3O94766 335 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 SLFN14P0C7P3 912 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 PPP2R3AQ06190 1150 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 SMAD2Q15796 467 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 ENOX2Q16206 610 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 DCLRE1AQ6PJP8 1040 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 PPFIBP1Q86W92 1011 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 GPR65Q8IYL9 337 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 SLC22A17Q8WUG5 538 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 HPS3Q969F9 1004 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 C18orf25Q96B23 403 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 DDX27Q96GQ7 796 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 RXFP1Q9HBX9 757 aa20.53■□□□□ 0.88
COL9A3-203ENST00000462700 CPSF3Q9UKF6 684 aaKnown RBP20.53■□□□□ 0.88
COL9A3-203ENST00000462700 BRWD1Q9NSI6 2320 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 PODXLO00592 558 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 EPCAMP16422 314 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 HOXB8P17481 243 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-203ENST00000462700 IGFBP6P24592 240 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-203ENST00000462700 KLRC2P26717 231 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 CASP1P29466 404 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 ADSSP30520 456 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 AFMP43652 599 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 ELAVL2Q12926 359 aaKnown RBP20.52■□□□□ 0.88
COL9A3-203ENST00000462700 RTP2Q5QGT7 225 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 SYCE2Q6PIF2 218 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 CD300LGQ6UXG3 332 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 UNC13DQ70J99 1090 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 C3orf58Q8NDZ4 430 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 GLIS3Q8NEA6 775 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 RIN2Q8WYP3 895 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-203ENST00000462700 BLZF1Q9H2G9 400 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 GDPD2Q9HCC8 539 aa20.52■□□□□ 0.88
COL9A3-203ENST00000462700 AGO2Q9UKV8 859 aaKnown RBP20.52■□□□□ 0.88
COL9A3-203ENST00000462700 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 A0A1W2PQ27 194 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 A0A1W2PQ64 194 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 A0A1W2PQD8 194 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 LACTBL1A8MY62 500 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 TEX28O15482 410 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 PRPF6O94906 941 aaKnown RBP20.51■□□□□ 0.87
COL9A3-203ENST00000462700 ADH1AP07327 375 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 ADRB2P07550 413 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 CLCN4P51793 760 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 SPAG1Q07617 926 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 CUL4BQ13620 913 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 POSTNQ15063 836 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 FAM171A1Q5VUB5 890 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 STXBP4Q6ZWJ1 553 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 POMGNT1Q8WZA1 660 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 KIF12Q96FN5 646 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 TTPALQ9BTX7 342 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 S1PR5Q9H228 398 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 TMEM206Q9H813 350 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL9A3-203ENST00000462700 TUBGCP4Q9UGJ1 667 aa20.51■□□□□ 0.87
COL9A3-203ENST00000462700 USP15Q9Y4E8 981 aaPredicted RBP20.51■□□□□ 0.87
COL9A3-203ENST00000462700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-203ENST00000462700 TNFRSF10AO00220 468 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 RPL9P32969 192 aaKnown RBP20.5■□□□□ 0.87
COL9A3-203ENST00000462700 ACOT2P49753 483 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 EHHADHQ08426 723 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 ZBTB6Q15916 424 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 FAM26FQ5R3K3 315 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-203ENST00000462700 CEP57Q86XR8 500 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 SYCP3Q8IZU3 236 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 PAGE5Q96GU1 130 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 APOL5Q9BWW9 433 aa20.5■□□□□ 0.87
COL9A3-203ENST00000462700 DZANK1Q9NVP4 752 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms