RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CARNS1A5YM72 827 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 DDTLA6NHG4 134 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RASA4BC9J798 803 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 IPO5O00410 1097 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 POLRMTO00411 1230 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KIF3CO14782 793 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CLGNO14967 610 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ATP2A1O14983 1001 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PRPF4O43172 522 aaKnown RBP eCLIP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RASA4O43374 803 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 DIAPH2O60879 1101 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZC3H11AO75152 810 aaKnown RBP eCLIP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ENTPD3O75355 529 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PROSCO94903 275 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 UNC5CO95185 931 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 LYPLA2O95372 231 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 LMNAP02545 664 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KRT16P08779 473 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TROVE2P10155 538 aaKnown RBP eCLIP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CCNB1P14635 433 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CYP11B1P15538 503 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ATP2A2P16615 1042 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TAL1P17542 331 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 HMGB2P26583 209 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 POLD1P28340 1107 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ABCD1P33897 745 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 GCKP35557 465 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SSR1P43307 286 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 NSFP46459 744 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 QARSP47897 775 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RASSF2P50749 326 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 GPC3P51654 580 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 JAK3P52333 1124 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 POLGP54098 1239 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CACNB3P54284 484 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 NCKAP1LP55160 1127 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 UBXN2AP68543 259 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 DLG4P78352 724 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RNASELQ05823 741 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ENPEPQ07075 957 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TCP10Q12799 353 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PTP4A2Q12974 167 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 DMP1Q13316 513 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SPARCL1Q14515 664 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TAF11Q15544 211 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TRIP13Q15645 432 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SNRNP35Q16560 246 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CCNG2Q16589 344 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KYNUQ16719 465 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KCTD19Q17RG1 926 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SHROOM1Q2M3G4 852 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PARP6Q2NL67 630 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TSNAXIP1Q2TAA8 658 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF568Q3ZCX4 644 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 GRIPAP1Q4V328 841 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 EAPPQ56P03 285 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 WDR44Q5JSH3 913 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SPDYAQ5MJ70 313 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 C1orf220Q5T0J3 134 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 UBAP2Q5T6F2 1119 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 HHATQ5VTY9 493 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CAPRIN2Q6IMN6 1127 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 CYP4F22Q6NT55 531 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 NSMFQ6X4W1 530 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TRIM72Q6ZMU5 477 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ASRGL1Q7L266 308 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SH3BP5LQ7L8J4 393 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PTF1AQ7RTS3 328 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 GSTA5Q7RTV2 222 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 HAUS6Q7Z4H7 955 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PODNQ7Z5L7 613 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 NRAPQ86VF7 1730 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SLC47A2Q86VL8 602 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TDRPQ86YL5 185 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SIAH1Q8IUQ4 282 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RELL1Q8IUW5 271 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KIAA0825Q8IV33 1275 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 MAP4K3Q8IVH8 894 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZFPM1Q8IX07 1006 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RHOT1Q8IXI2 618 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 LMNTD2Q8IXW0 634 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SRRM1Q8IYB3 904 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZDHHC14Q8IZN3 488 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 SPICE1Q8N0Z3 855 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 DAW1Q8N136 415 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZCCHC9Q8N567 271 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 FBXL13Q8NEE6 735 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 HELQQ8TDG4 1101 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 TMC2Q8TDI7 906 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 LRRC8CQ8TDW0 803 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 FBXO41Q8TF61 875 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ATG4AQ8WYN0 398 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 PRCCQ92733 491 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 INPP5DQ92835 1189 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KAT5Q92993 513 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 THOC1Q96FV9 657 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 NGLY1Q96IV0 654 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 RBM41Q96IZ5 413 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 BTBD6Q96KE9 485 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms