RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
APP-211ENST00000462267 SDK1Q7Z5N4 2213 aa16.93■□□□□ 0.3
APP-211ENST00000462267 GREB1Q4ZG55 1949 aa16.92■□□□□ 0.3
APP-211ENST00000462267 A0A1B0GUA9 196 aa16.92■□□□□ 0.3
APP-211ENST00000462267 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
APP-211ENST00000462267 ZNF263O14978 683 aa16.92■□□□□ 0.3
APP-211ENST00000462267 LRG1P02750 347 aa16.92■□□□□ 0.3
APP-211ENST00000462267 FGFR3P22607 806 aa16.92■□□□□ 0.3
APP-211ENST00000462267 PPP2R5CQ13362 524 aa16.92■□□□□ 0.3
APP-211ENST00000462267 VITQ6UXI7 678 aa16.92■□□□□ 0.3
APP-211ENST00000462267 C4orf19Q8IY42 314 aa16.92■□□□□ 0.3
APP-211ENST00000462267 MTRQ99707 1265 aa16.92■□□□□ 0.3
APP-211ENST00000462267 NFKBIZQ9BYH8 718 aa16.92■□□□□ 0.3
APP-211ENST00000462267 WRAP73Q9P2S5 460 aaPredicted RBP16.92■□□□□ 0.3
APP-211ENST00000462267 BACE2Q9Y5Z0 518 aa16.92■□□□□ 0.3
APP-211ENST00000462267 CDY1Q9Y6F8 540 aa16.92■□□□□ 0.3
APP-211ENST00000462267 WDR27A2RRH5 827 aa16.91■□□□□ 0.3
APP-211ENST00000462267 EPN2O95208 641 aa16.91■□□□□ 0.3
APP-211ENST00000462267 THP07101 528 aa16.91■□□□□ 0.3
APP-211ENST00000462267 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
APP-211ENST00000462267 DGKKQ5KSL6 1271 aa16.91■□□□□ 0.3
APP-211ENST00000462267 PSAPL1Q6NUJ1 521 aa16.91■□□□□ 0.3
APP-211ENST00000462267 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
APP-211ENST00000462267 PCDHGA5Q9Y5G8 931 aa16.91■□□□□ 0.3
APP-211ENST00000462267 COL4A2P08572 1712 aa16.9■□□□□ 0.3
APP-211ENST00000462267 B4GALT5O43286 388 aa16.9■□□□□ 0.3
APP-211ENST00000462267 ELF1P32519 619 aa16.9■□□□□ 0.3
APP-211ENST00000462267 RAP1GAPP47736 663 aa16.9■□□□□ 0.3
APP-211ENST00000462267 CCDC6Q16204 474 aa16.9■□□□□ 0.3
APP-211ENST00000462267 XKR9Q5GH70 373 aa16.9■□□□□ 0.3
APP-211ENST00000462267 PLA2G2CQ5R387 149 aa16.9■□□□□ 0.3
APP-211ENST00000462267 LRSAM1Q6UWE0 723 aa16.9■□□□□ 0.3
APP-211ENST00000462267 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
APP-211ENST00000462267 CDR2LQ86X02 465 aaPredicted RBP16.9■□□□□ 0.3
APP-211ENST00000462267 MFSD6LQ8IWD5 586 aa16.9■□□□□ 0.3
APP-211ENST00000462267 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
APP-211ENST00000462267 TCEAL4Q96EI5 215 aa16.9■□□□□ 0.3
APP-211ENST00000462267 CORO1BQ9BR76 489 aa16.9■□□□□ 0.3
APP-211ENST00000462267 ESYT1Q9BSJ8 1104 aa16.9■□□□□ 0.3
APP-211ENST00000462267 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
APP-211ENST00000462267 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
APP-211ENST00000462267 C8orf33Q9H7E9 229 aaPredicted RBP16.9■□□□□ 0.3
APP-211ENST00000462267 TRPV4Q9HBA0 871 aa16.9■□□□□ 0.3
APP-211ENST00000462267 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
APP-211ENST00000462267 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
APP-211ENST00000462267 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
APP-211ENST00000462267 VPS54Q9P1Q0 977 aa16.9■□□□□ 0.3
APP-211ENST00000462267 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
APP-211ENST00000462267 VAV3Q9UKW4 847 aa16.9■□□□□ 0.3
APP-211ENST00000462267 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
APP-211ENST00000462267 ARNTLO00327 626 aa16.89■□□□□ 0.29
APP-211ENST00000462267 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
APP-211ENST00000462267 PRRG1O14668 218 aa16.89■□□□□ 0.29
APP-211ENST00000462267 PTGESO14684 152 aa16.89■□□□□ 0.29
APP-211ENST00000462267 NLRP5P59047 1200 aa16.89■□□□□ 0.29
APP-211ENST00000462267 CAPSQ13938 189 aa16.89■□□□□ 0.29
APP-211ENST00000462267 NAB2Q15742 525 aa16.89■□□□□ 0.29
APP-211ENST00000462267 CYP4A22Q5TCH4 519 aa16.89■□□□□ 0.29
APP-211ENST00000462267 Q6ZS52 159 aa16.89■□□□□ 0.29
APP-211ENST00000462267 PDZD4Q76G19 769 aaPredicted RBP16.89■□□□□ 0.29
APP-211ENST00000462267 CSGALNACT1Q8TDX6 532 aa16.89■□□□□ 0.29
APP-211ENST00000462267 GAB3Q8WWW8 586 aa16.89■□□□□ 0.29
APP-211ENST00000462267 COL26A1Q96A83 441 aa16.89■□□□□ 0.29
APP-211ENST00000462267 E2F7Q96AV8 911 aa16.89■□□□□ 0.29
APP-211ENST00000462267 FAM20AQ96MK3 541 aa16.89■□□□□ 0.29
APP-211ENST00000462267 LXNQ9BS40 222 aa16.89■□□□□ 0.29
APP-211ENST00000462267 TMEM121BQ9BXQ6 578 aaPredicted RBP16.89■□□□□ 0.29
APP-211ENST00000462267 XPNPEP1Q9NQW7 623 aa16.89■□□□□ 0.29
APP-211ENST00000462267 CCDC163A0A0D9SF12 145 aa16.88■□□□□ 0.29
APP-211ENST00000462267 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
APP-211ENST00000462267 ABLIM3O94929 683 aa16.88■□□□□ 0.29
APP-211ENST00000462267 VIPR2P41587 438 aa16.88■□□□□ 0.29
APP-211ENST00000462267 NOVA1P51513 510 aaKnown RBP16.88■□□□□ 0.29
APP-211ENST00000462267 FGD1P98174 961 aa16.88■□□□□ 0.29
APP-211ENST00000462267 EPHA7Q15375 998 aa16.88■□□□□ 0.29
APP-211ENST00000462267 TSGA10IPQ3SY00 556 aa16.88■□□□□ 0.29
APP-211ENST00000462267 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
APP-211ENST00000462267 TCEAL8Q8IYN2 117 aa16.88■□□□□ 0.29
APP-211ENST00000462267 SYNPOQ8N3V7 929 aa16.88■□□□□ 0.29
APP-211ENST00000462267 ZSWIM3Q96MP5 696 aa16.88■□□□□ 0.29
APP-211ENST00000462267 ADAM33Q9BZ11 813 aa16.88■□□□□ 0.29
APP-211ENST00000462267 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
APP-211ENST00000462267 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
APP-211ENST00000462267 VWA8A3KMH1 1905 aa16.88■□□□□ 0.29
APP-211ENST00000462267 NID2Q14112 1375 aa16.88■□□□□ 0.29
APP-211ENST00000462267 TICRRQ7Z2Z1 1910 aa16.88■□□□□ 0.29
APP-211ENST00000462267 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
APP-211ENST00000462267 RPP40O75818 363 aaKnown RBP16.87■□□□□ 0.29
APP-211ENST00000462267 B3GAT3O94766 335 aa16.87■□□□□ 0.29
APP-211ENST00000462267 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
APP-211ENST00000462267 ARL2P36404 184 aa16.87■□□□□ 0.29
APP-211ENST00000462267 CCR2P41597 374 aa16.87■□□□□ 0.29
APP-211ENST00000462267 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
APP-211ENST00000462267 KPNA1P52294 538 aaPredicted RBP16.87■□□□□ 0.29
APP-211ENST00000462267 ROR1Q01973 937 aa16.87■□□□□ 0.29
APP-211ENST00000462267 SLC8B1Q6J4K2 584 aa16.87■□□□□ 0.29
APP-211ENST00000462267 KBTBD6Q86V97 674 aa16.87■□□□□ 0.29
APP-211ENST00000462267 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
APP-211ENST00000462267 ASAP3Q8TDY4 903 aa16.87■□□□□ 0.29
APP-211ENST00000462267 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms