RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 OSBPL3Q9H4L5 887 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 MKNK2Q9HBH9 465 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ATAD3AQ9NVI7 634 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 MICAL3Q7RTP6 2002 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ZMYM2Q9UBW7 1377 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 KMT2EQ8IZD2 1858 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ACTN4O43707 911 aaKnown RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 CSPG5O95196 566 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ITGA2BP08514 1039 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 BDNFP23560 247 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 HALP42357 657 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 MSH2P43246 934 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 PMS2P54278 862 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 UBE3AQ05086 875 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 CAMK2BQ13554 666 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 RCN2Q14257 317 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 SHROOM1Q2M3G4 852 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 PPP4R3AQ6IN85 833 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 RASGRP2Q7LDG7 609 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 TRAPPC11Q7Z392 1133 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ANKS4BQ8N8V4 417 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 USP38Q8NB14 1042 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 DNAJC9Q8WXX5 260 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 RAPGEF5Q92565 580 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 PTPRN2Q92932 1015 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 P2RX5Q93086 422 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 HLA-CQ95604 372 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 KLHL29Q96CT2 875 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 TGS1Q96RS0 853 aaKnown RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 DDX50Q9BQ39 737 aaKnown RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 KCNMB3Q9NPA1 279 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 HSFX1Q9UBD0 423 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 POTEB3A0JP26 581 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 TRIM64CA6NLI5 447 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PDE2AO00408 941 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 IQCF3P0C7M6 154 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 IL4RP24394 825 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 RNASELQ05823 741 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 ITIH3Q06033 890 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PPARAQ07869 468 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 CBX2Q14781 532 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 TRIM71Q2Q1W2 868 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 GLE1Q53GS7 698 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 WDR78Q5VTH9 848 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 POTEBQ6S5H4 581 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 NEK10Q6ZWH5 1172 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ZC3H18Q86VM9 953 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 PPFIBP2Q8ND30 876 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 CCDC127Q96BQ5 260 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 WNT8AQ9H1J5 351 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 CCDC68Q9H2F9 335 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ECT2Q9H8V3 914 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 HESX1Q9UBX0 185 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 CIDEBQ9UHD4 219 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 KIAA1671Q9BY89 1806 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 PAPLNO95428 1278 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ATF7P17544 494 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 SERPINB3P29508 390 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ATN1P54259 1190 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 KIF5AQ12840 1032 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 KLHL10Q6JEL2 608 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PDCD7Q8N8D1 485 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 MIGA1Q8NAN2 632 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 MRPL38Q96DV4 380 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 MTMR8Q96EF0 704 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 ARMT1Q9H993 441 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 JADE2Q9NQC1 790 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 FAM114A2Q9NRY5 505 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 TLR7Q9NYK1 1049 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 SSX2IPQ9Y2D8 614 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 MRPL11Q9Y3B7 192 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 LRRC42Q9Y546 428 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 SALL3Q9BXA9 1300 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 LOXHD1Q8IVV2 1947 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 NPHP3-ACAD11A0A0J9YXS1 232 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 PROB1E7EW31 1015 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 SART1O43290 800 aaKnown RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 PEX14O75381 377 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 UBOX5O94941 541 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 AMHP03971 560 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 ASLP04424 464 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 GSTA2P09210 222 aa6.28□□□□□ -1.4
CLK1-207ENST00000461981 UBTFL6P0CB48 400 aaPredicted RBP6.28□□□□□ -1.4
CLK1-207ENST00000461981 ZCCHC18P0CG32 403 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms