RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 GDAQ9Y2T3 454 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 ZNF318Q5VUA4 2279 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 SLC16A4O15374 487 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 RFPL2O75678 378 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ZMYND10O75800 440 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 MAPTP10636 758 aaKnown RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 SCP2P22307 547 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 YARSP54577 528 aaKnown RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 RAB33AQ14088 237 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 UPP1Q16831 310 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 PRSS55Q6UWB4 352 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 MPZL3Q6UWV2 235 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ZPBP2Q6X784 338 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 RTL10Q7L3V2 364 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ZBTB33Q86T24 672 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 SUGP1Q8IWZ8 645 aaKnown RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 CEP120Q8N960 986 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 TOPORSQ9NS56 1045 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-207ENST00000461798 SLC38A7Q9NVC3 462 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 IGSF9Q9P2J2 1179 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 BACE2Q9Y5Z0 518 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 ZDBF2Q9HCK1 2354 aa10.04□□□□□ -0.8
BRCA1-207ENST00000461798 H0YCG3 227 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 TRAPPC3O43617 180 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 TOM1L1O75674 476 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 B3GAT3O94766 335 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 ASGR2P07307 311 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 POU2F2P09086 479 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 HNRNPA1P09651 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 SPATA31D3P0C874 917 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 RPL17P18621 184 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 PDCP20941 246 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 IGFBP6P24592 240 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 AVPR2P30518 371 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 HOXA9P31269 272 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 RPL9P32969 192 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 UBA7P41226 1012 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 CLCNKBP51801 687 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 NCKAP1LP55160 1127 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 TDGQ13569 410 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 ZRSR1Q15695 479 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 PSMD5Q16401 504 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 UVSSAQ2YD98 709 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 SPATA31D4Q6ZUB0 917 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 SMG7Q92540 1137 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 STAMQ92783 540 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 NXPE3Q969Y0 559 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 CALML4Q96GE6 196 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 CDK5RAP3Q96JB5 506 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 SNX27Q96L92 541 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 ZMAT2Q96NC0 199 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 PLIN2Q99541 437 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 TCHPQ9BT92 498 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 BLOC1S4Q9NUP1 217 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
BRCA1-207ENST00000461798 EPS15L1Q9UBC2 864 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 MTRRQ9UBK8 725 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 ODF2LQ9ULJ1 636 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 CLUHO75153 1309 aa10.03□□□□□ -0.8
BRCA1-207ENST00000461798 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 ADAM12O43184 909 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 N4BP1O75113 896 aaKnown RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 ZNF131P52739 623 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 NHLH1Q02575 133 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 SOX4Q06945 474 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 MCL1Q07820 350 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 RAD51AP2Q09MP3 1159 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 STRN3Q13033 797 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 SLC10A6Q3KNW5 377 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 GLRA4Q5JXX5 417 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 CEP57Q86XR8 500 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 LRRC15Q8TF66 581 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 HASPINQ8TF76 798 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 ZBTB45Q96K62 511 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 CCSER1Q9C0I3 900 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 KCNK12Q9HB15 430 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.02□□□□□ -0.817e-7■□□□□ 9.9
BRCA1-207ENST00000461798 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 ZFP37Q9Y6Q3 630 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 MORC2Q9Y6X9 1032 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-207ENST00000461798 TRIOO75962 3097 aa10.02□□□□□ -0.81
BRCA1-207ENST00000461798 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
BRCA1-207ENST00000461798 NPHP3-ACAD11A0A0J9YXS1 232 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 SYN3O14994 580 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 CLDN3O15551 220 aa10.01□□□□□ -0.81
BRCA1-207ENST00000461798 TBC1D4O60343 1298 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms