RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 STAT4Q14765 748 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 MFSD14BQ5SR56 506 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 TTC39AQ5SRH9 613 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 PIK3R6Q5UE93 754 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 C15orf52Q6ZUT6 534 aaKnown RBP5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 RIOX2Q8IUF8 465 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 SMC5Q8IY18 1101 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 CNPY4Q8N129 248 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 TTC9BQ8N6N2 239 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 KYQ8NBH2 561 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 USP7Q93009 1102 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 KIF1BPQ96EK5 621 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 TTC1Q99614 292 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 GPR20Q99678 358 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 COA1Q9GZY4 146 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 MARCH2Q9P0N8 246 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 CNOT7Q9UIV1 285 aaKnown RBP5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 PCDHA8Q9Y5H6 950 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 PSME4Q14997 1843 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 CLRN2A0PK11 232 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 GOLIM4O00461 696 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 TRAF5O00463 557 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SGSM2O43147 1006 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 IFIT2P09913 472 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 INSRRP14616 1297 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 EPHX2P34913 555 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SCNN1BP51168 640 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ADAM17P78536 824 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ITKQ08881 620 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SMAD4Q13485 552 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 CAVIN4Q5BKX8 364 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 STRIP1Q5VSL9 837 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 IQCEQ6IPM2 695 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 RSPO2Q6UXX9 243 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ADGRA1Q86SQ6 560 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 MTDHQ86UE4 582 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ERC1Q8IUD2 1116 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 PPIL6Q8IXY8 311 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 GPC2Q8N158 579 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SPATA5Q8NB90 893 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 OR2W6PQ8NHA6 318 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 NPLOC4Q8TAT6 608 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 FRS2Q8WU20 508 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SAMD11Q96NU1 681 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ZFYVE21Q9BQ24 234 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 PHF20Q9BVI0 1012 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ASPSCR1Q9BZE9 553 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 RWDD1Q9H446 243 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 TAF1DQ9H5J8 278 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 IFT22Q9H7X7 185 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 GPR108Q9NPR9 543 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SMPD4Q9NXE4 827 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 GPRC5DQ9NZD1 345 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 SAMD15Q9P1V8 674 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 ABCF2Q9UG63 623 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 NPFFR2Q9Y5X5 522 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM205AQ6ZU69 1335 aa5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 WDR33Q9C0J8 1336 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-203ENST00000460928 C22orf46C9J442 243 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ADM5C9JUS6 153 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 C1QTNF3-AMACRE9PGA6 284 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ARNTLO00327 626 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 NEMP1O14524 444 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 MEFVO15553 781 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 PLATP00750 562 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 GPR85P60893 370 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM193AP78312 1265 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 NUCB1Q02818 461 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 MTMR1Q13613 665 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 TNIP1Q15025 636 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 NFE2Q16621 373 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 INF2Q27J81 1249 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 PRR31Q5SQ13 230 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ACBD5Q5T8D3 534 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 MROH9Q5TGP6 573 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 E4F1Q66K89 784 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ABHD17CQ6PCB6 329 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 DDX53Q86TM3 631 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ZC3H18Q86VM9 953 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 CHD1LQ86WJ1 897 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 SPATS2Q86XZ4 545 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 FAM126BQ8IXS8 530 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 CLASRPQ8N2M8 674 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 PRMT6Q96LA8 375 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 ORAI3Q9BRQ5 295 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 C1QTNF3Q9BXJ4 246 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 GLIS2Q9BZE0 524 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 NGRNQ9NPE2 291 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-203ENST00000460928 GPR27Q9NS67 375 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms