RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 GREB1LQ9C091 1923 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 NEDD4P46934 1319 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 RPAP1Q9BWH6 1393 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 CCDC194A0A1B0GVG4 234 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 C22orf46C9J442 243 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SLC27A2O14975 620 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 DYRK3O43781 588 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 CREB3O43889 395 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PRDM1O75626 825 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 DGKIO75912 1065 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 GDF11O95390 407 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 BAG3O95817 575 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SCGB1D2O95969 90 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 FGAP02671 866 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PROCP04070 461 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PRNPP04156 253 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 FPR2P25090 351 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PLCD1P51178 756 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SMAD3P84022 425 aaKnown RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SATB1Q01826 763 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 IKZF1Q13422 519 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 TERF2Q15554 542 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SMAD2Q15796 467 aaKnown RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 CYP4F22Q6NT55 531 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 CTR9Q6PD62 1173 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 STOX1Q6ZVD7 989 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 NOSTRINQ8IVI9 506 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 CHPFQ8IZ52 775 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 UHMK1Q8TAS1 419 aaKnown RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 HOOK2Q96ED9 719 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 AHCYL2Q96HN2 611 aaKnown RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 ALPK1Q96QP1 1244 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SMAD5Q99717 465 aaKnown RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 GLIS2Q9BZE0 524 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 OSBPL5Q9H0X9 879 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 NAPBQ9H115 298 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PDCL3Q9H2J4 239 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 DNAJC18Q9H819 358 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 VTA1Q9NP79 307 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 MCM9Q9NXL9 1143 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 H2AFY2Q9P0M6 372 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 SRPK3Q9UPE1 567 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PHIPQ8WWQ0 1821 aa5.71□□□□□ -1.5
SF3A3-202ENST00000460925 PTPRFP10586 1907 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 MAN2B1O00754 1011 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 DVL2O14641 736 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 PRC1O43663 620 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 CLASP2O75122 1294 aaKnown RBP5.7□□□□□ -1.5
SF3A3-202ENST00000460925 CYP21A2P08686 494 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 YY1P25490 414 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 SLC6A11P48066 632 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 RTP1P59025 263 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 IRF9Q00978 393 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 CHRNEQ04844 493 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 PRKG1Q13976 671 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 LRRC41Q15345 812 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ZNF174Q15697 407 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ADCK5Q3MIX3 580 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 HSF5Q4G112 596 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-202ENST00000460925 BROXQ5VW32 411 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 GALNT18Q6P9A2 607 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 MOB2Q70IA6 237 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 RASSF3Q86WH2 238 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 WFDC3Q8IUB2 231 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 TCEAL8Q8IYN2 117 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 NLGN4XQ8N0W4 816 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 LZTR1Q8N653 840 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ZNF610Q8N9Z0 462 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 SH3RF2Q8TEC5 729 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 DLG3Q92796 817 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 PMM1Q92871 262 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 MAP4K1Q92918 833 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 TCEANC2Q96MN5 208 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 LRRC2Q9BYS8 371 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ADAMTS10Q9H324 1103 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 CARS2Q9HA77 564 aaKnown RBP5.7□□□□□ -1.5
SF3A3-202ENST00000460925 AASDHPPTQ9NRN7 309 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 TMOD2Q9NZR1 351 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 NRBP1Q9UHY1 535 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ACSL6Q9UKU0 697 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 B3GALT1Q9Y5Z6 326 aa5.7□□□□□ -1.5
SF3A3-202ENST00000460925 ATRNL1Q5VV63 1379 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 NOTOA8MTQ0 251 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 NKRFO15226 690 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3A3-202ENST00000460925 DTNBO60941 627 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 REC8O95072 547 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 TGFB1P01137 390 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 FUCA1P04066 466 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 GNAT2P19087 354 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 BDNFP23560 247 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 LSP1P33241 339 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 GRIK1P39086 918 aa5.69□□□□□ -1.5
SF3A3-202ENST00000460925 ANP32AP39687 249 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms