RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 NT5DC4Q86YG4 428 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 PLEKHO2Q8TD55 490 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
CDHR4-203ENST00000460430 VWCEQ96DN2 955 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 BORCS6Q96GS4 357 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
CDHR4-203ENST00000460430 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDHR4-203ENST00000460430 TRIM5Q9C035 493 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 MTMR12Q9C0I1 747 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 TMEM8AQ9HCN3 771 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 SLC38A7Q9NVC3 462 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 DERAQ9Y315 318 aa11.58□□□□□ -0.56
CDHR4-203ENST00000460430 R3HCC1Q9Y3T6 440 aaKnown RBP11.58□□□□□ -0.56
CDHR4-203ENST00000460430 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 LGALS16A8MUM7 142 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 MEFVO15553 781 aaPredicted RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 POMCP01189 267 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 KCNE1P15382 129 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 GTF2H1P32780 548 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 PIK3CAP42336 1068 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 FMO5P49326 533 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 EPHB4P54760 987 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 UBASH3AP57075 661 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 DEFB103AP81534 67 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 UBXN1Q04323 297 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 GRIK3Q13003 919 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 DUOXA2Q1HG44 320 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 TMEM240Q5SV17 173 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 KRT39Q6A163 491 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 EFCAB13Q8IY85 973 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 BEST2Q8NFU1 509 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 MRPL9Q9BYD2 267 aaKnown RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 TUBGCP4Q9UGJ1 667 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 UBQLN1Q9UMX0 589 aaKnown RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
CDHR4-203ENST00000460430 PTPRJQ12913 1337 aa11.57□□□□□ -0.56
CDHR4-203ENST00000460430 TET1Q8NFU7 2136 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 SMIM28A0A1B0GU29 152 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 PTGESO14684 152 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 OFD1O75665 1012 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 THP07101 528 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 KRT19P08727 400 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 MRE11P49959 708 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CLDN10P78369 228 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 PPP3CAQ08209 521 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 TRPC3Q13507 836 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 PAN2Q504Q3 1202 aaKnown RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 NOMO2Q5JPE7 1267 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 MIIPQ5JXC2 388 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 C1orf220Q5T0J3 134 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 SARM1Q6SZW1 724 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 LRRC43Q8N309 656 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 CCDC150Q8NCX0 1101 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 OR5B17Q8NGF7 314 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 HERVK_113Q902F9 699 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 ANP32BQ92688 251 aaKnown RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 C18orf25Q96B23 403 aaPredicted RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 FAM84AQ96KN4 292 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 RNPC3Q96LT9 517 aaKnown RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 ZMAT2Q96NC0 199 aaKnown RBP11.56□□□□□ -0.56
CDHR4-203ENST00000460430 SLC9A7Q96T83 725 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 IMPG2Q9BZV3 1241 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 TMEM117Q9H0C3 514 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 RNF19AQ9NV58 838 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 GCNT4Q9P109 453 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 KANSL3Q9P2N6 904 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 SLC4A7Q9Y6M7 1214 aa11.56□□□□□ -0.56
CDHR4-203ENST00000460430 ITGB3P05106 788 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 GATMP50440 423 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 TDRD10Q5VZ19 366 aaKnown RBP11.55□□□□□ -0.56
CDHR4-203ENST00000460430 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 APTXQ7Z2E3 356 aaKnown RBP11.55□□□□□ -0.56
CDHR4-203ENST00000460430 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 TMCO2Q7Z6W1 182 aaPredicted RBP11.55□□□□□ -0.56
CDHR4-203ENST00000460430 FBXL13Q8NEE6 735 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 TOP1MTQ969P6 601 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 PPP1R10Q96QC0 940 aaKnown RBP11.55□□□□□ -0.56
CDHR4-203ENST00000460430 YME1L1Q96TA2 773 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
CDHR4-203ENST00000460430 UBE2OQ9C0C9 1292 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms