RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 FGFR3P22607 806 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 ARPP19P56211 112 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 CREMQ03060 361 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 CSTF1Q05048 431 aaKnown RBP16.61■□□□□ 0.25
LMNA-209ENST00000459904 MAPK6Q16659 721 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 PABPC1LQ4VXU2 614 aaKnown RBP16.61■□□□□ 0.25
LMNA-209ENST00000459904 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 TCEAL4Q96EI5 215 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
LMNA-209ENST00000459904 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 TUFT1Q9NNX1 390 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 ACKR2O00590 384 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
LMNA-209ENST00000459904 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
LMNA-209ENST00000459904 CYP11B2P19099 503 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 TARSP26639 723 aaKnown RBP16.6■□□□□ 0.25
LMNA-209ENST00000459904 RAB33AQ14088 237 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 TRIM29Q14134 588 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 GRM2Q14416 872 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 TANGO2Q6ICL3 276 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 TPRG1Q6ZUI0 275 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 ERMP1Q7Z2K6 904 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 GPR65Q8IYL9 337 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 SUMF1Q8NBK3 374 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 PPP1R10Q96QC0 940 aaKnown RBP16.6■□□□□ 0.25
LMNA-209ENST00000459904 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 MTRRQ9UBK8 725 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 SDK1Q7Z5N4 2213 aa16.6■□□□□ 0.25
LMNA-209ENST00000459904 SHISA7A6NL88 538 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 XYLBO75191 536 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 RHOP08100 348 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 NEK4P51957 841 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 FOXK2Q01167 660 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 ATF7IP2Q5U623 682 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
LMNA-209ENST00000459904 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
LMNA-209ENST00000459904 ZMAT2Q96NC0 199 aaKnown RBP16.59■□□□□ 0.25
LMNA-209ENST00000459904 POLR3CQ9BUI4 534 aaPredicted RBP16.59■□□□□ 0.25
LMNA-209ENST00000459904 C2orf40Q9H1Z8 148 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 LTB4R2Q9NPC1 389 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 HEBP1Q9NRV9 189 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 MRPS23Q9Y3D9 190 aaKnown RBP16.59■□□□□ 0.25
LMNA-209ENST00000459904 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
LMNA-209ENST00000459904 ZNF638Q14966 1978 aaKnown RBP16.58■□□□□ 0.25
LMNA-209ENST00000459904 PP2D1A8MPX8 630 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 MEFVO15553 781 aaPredicted RBP16.58■□□□□ 0.24
LMNA-209ENST00000459904 LAMTOR5O43504 91 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 SEC24AO95486 1093 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 C1RP00736 705 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 HARSP12081 509 aaKnown RBP16.58■□□□□ 0.24
LMNA-209ENST00000459904 GJA1P17302 382 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 RPA1P27694 616 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
LMNA-209ENST00000459904 NAMPTP43490 491 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 ANKRD1Q15327 319 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 UPP1Q16831 310 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 SEZ6Q53EL9 994 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 DGLUCYQ7Z3D6 616 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 HS6ST3Q8IZP7 471 aa16.58■□□□□ 0.24
LMNA-209ENST00000459904 ZBTB45Q96K62 511 aaPredicted RBP16.58■□□□□ 0.24
LMNA-209ENST00000459904 DDX23Q9BUQ8 820 aaKnown RBP16.58■□□□□ 0.24
LMNA-209ENST00000459904 NCANO14594 1321 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 WDR27A2RRH5 827 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 SEC24BO95487 1268 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 HOXA9P31269 272 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 CCR2P41597 374 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 CDR1P51861 262 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 ROR1Q01973 937 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
LMNA-209ENST00000459904 MTSS1LQ765P7 747 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 TAS1R3Q7RTX0 852 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 RUBCNQ92622 972 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 SHDQ96IW2 340 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 CORO1BQ9BR76 489 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 CDT1Q9H211 546 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 NDRG2Q9UN36 371 aaKnown RBP16.57■□□□□ 0.24
LMNA-209ENST00000459904 KIAA1024Q9UPX6 916 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 ZFP37Q9Y6Q3 630 aaPredicted RBP16.57■□□□□ 0.24
LMNA-209ENST00000459904 TCHHQ07283 1943 aa16.57■□□□□ 0.24
LMNA-209ENST00000459904 CCDC169A6NNP5 214 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 E9PMD0 336 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 CDC25AP30304 524 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 PEX3P56589 373 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
LMNA-209ENST00000459904 LPAL2Q16609 132 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 DCAF4L1Q3SXM0 396 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 TTC38Q5R3I4 469 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
LMNA-209ENST00000459904 ZC3H14Q6PJT7 736 aaKnown RBP16.56■□□□□ 0.24
LMNA-209ENST00000459904 ZSWIM3Q96MP5 696 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 TARS2Q9BW92 718 aaKnown RBP16.56■□□□□ 0.24
LMNA-209ENST00000459904 SEMA4AQ9H3S1 761 aa16.56■□□□□ 0.24
LMNA-209ENST00000459904 DDX19AQ9NUU7 478 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms