RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ALG13Q9NP73 1137 aaKnown RBP13.95□□□□□ -0.18
COL18A1-206ENST00000459895 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 KANSL3Q9P2N6 904 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 PLXNA3P51805 1871 aa13.95□□□□□ -0.18
COL18A1-206ENST00000459895 TRIM49BA6NDI0 452 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 PDXKO00764 312 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 NRP1O14786 923 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 KIF20AO95235 890 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 GALTP07902 379 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
COL18A1-206ENST00000459895 SNRNP35Q16560 246 aaKnown RBP13.94□□□□□ -0.18
COL18A1-206ENST00000459895 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 C3orf58Q8NDZ4 430 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
COL18A1-206ENST00000459895 CTNND2Q9UQB3 1225 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 TRAF3IP3Q9Y228 551 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 PCDHGC5Q9Y5F6 944 aa13.94□□□□□ -0.18
COL18A1-206ENST00000459895 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 RB1P06400 928 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 FOSL2P15408 326 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 ALDH7A1P49419 539 aaKnown RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 CLCNKBP51801 687 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 XXYLT1Q8NBI6 393 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 GAS2L1Q99501 681 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 GZF1Q9H116 711 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-206ENST00000459895 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
COL18A1-206ENST00000459895 PODXLO00592 558 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 PPEF2O14830 753 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 CALUO43852 315 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-206ENST00000459895 EXOC3O60645 756 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 IL18RAPO95256 599 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
COL18A1-206ENST00000459895 NR2F2P24468 414 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 IRS1P35568 1242 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 CASP4P49662 377 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 PLCB3Q01970 1234 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 CAMK1Q14012 370 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 DPCR1Q3MIW9 517 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
COL18A1-206ENST00000459895 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 POF1BQ8WVV4 589 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
COL18A1-206ENST00000459895 C2CD2Q9Y426 696 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
COL18A1-206ENST00000459895 SCN1AP35498 2009 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 PSMA7O14818 248 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 EFEMP2O95967 443 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 IGFBP4P22692 258 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 NFIL3Q16649 462 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 UPP1Q16831 310 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 EDRF1Q3B7T1 1238 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 CCDC183Q5T5S1 534 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 PLPP4Q5VZY2 271 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 FUT10Q6P4F1 479 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 CD302Q8IX05 232 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 ZC3H3Q8IXZ2 948 aaKnown RBP13.91□□□□□ -0.18
COL18A1-206ENST00000459895 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-206ENST00000459895 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 RDH13Q8NBN7 331 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 SPPL3Q8TCT6 385 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 TMEM174Q8WUU8 243 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
COL18A1-206ENST00000459895 UROC1Q96N76 676 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 GTPBP4Q9BZE4 634 aaKnown RBP13.91□□□□□ -0.18
COL18A1-206ENST00000459895 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 ASB7Q9H672 318 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 FAN1Q9Y2M0 1017 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 DERAQ9Y315 318 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 MTCH2Q9Y6C9 303 aa13.91□□□□□ -0.18
COL18A1-206ENST00000459895 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.181e-6■■■□□ 17.2
COL18A1-206ENST00000459895 COL6A3P12111 3177 aa13.9□□□□□ -0.18
COL18A1-206ENST00000459895 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms