RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ELOA2Q8IYF1 753 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 DTX3LQ8TDB6 740 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 CCT7Q99832 543 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TEKT3Q9BXF9 490 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 MRPS26Q9BYN8 205 aaKnown RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 KCNF1Q9H3M0 494 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 WDR91A4D1P6 747 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 RSPH10B2B2RC85 870 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TCP11X1B4DZS4 312 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 AHCYL1O43865 530 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 RSPH10BP0C881 870 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 FDX1P10109 184 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 EPHB1P54762 984 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 DMP1Q13316 513 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 TAF12Q16514 161 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TRIM67Q6ZTA4 783 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TPH2Q8IWU9 490 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.31□□□□□ -0.76
UFD1-205ENST00000459854 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 CHN1P15882 459 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 RASA1P20936 1047 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ARL4AP40617 200 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 LUZP2Q86TE4 346 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 TRIM69Q86WT6 500 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 CDR2LQ86X02 465 aaPredicted RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 B4GALNT2Q8NHY0 566 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 POMGNT1Q8WZA1 660 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 HINFPQ9BQA5 517 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 PSTPIP2Q9H939 334 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 SPAG6O75602 509 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 MYCNP04198 464 aaPredicted RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 FSTL1Q12841 308 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 BRD8Q9H0E9 1235 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 EPS8L2Q9H6S3 715 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 TMEM51Q9NW97 253 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 GGA2Q9UJY4 613 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 NEDD4P46934 1319 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 SSU72P8A0A1W2PR75 194 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 TMEM88BA6NKF7 163 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 SH2B2O14492 632 aaPredicted RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 WDR47O94967 919 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ITIH2P19823 946 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 WASHC2DQ5SRD0 308 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 CPXCR1Q8N123 301 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 NSL1Q96IY1 281 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ZFRQ96KR1 1074 aaKnown RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 RAD21L1Q9H4I0 556 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 PCDHAC2Q9Y5I4 1007 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 LRP5O75197 1615 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 M0R3G1 203 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ANP32DO95626 131 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 SMARCA1P28370 1054 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 ADCY1Q08828 1119 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 UNC13DQ70J99 1090 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 HIPK4Q8NE63 616 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 PRPF18Q99633 342 aaKnown RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 HACD3Q9P035 362 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
UFD1-205ENST00000459854 FEM1BQ9UK73 627 aa10.3□□□□□ -0.76
UFD1-205ENST00000459854 FAM47DPA6NHR8 397 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 PPARGP37231 505 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 SERPINB8P50452 374 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 JADE3Q92613 823 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 ATP6V1E2Q96A05 226 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 TRAPPC9Q96Q05 1148 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 DDX56Q9NY93 547 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 LZTS1Q9Y250 596 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 TUBGCP6Q96RT7 1819 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 CASZ1Q86V15 1759 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 KPNA4O00629 521 aaPredicted RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 FKBP6O75344 327 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 PLA2G4AP47712 749 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 KYNUQ16719 465 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 PRMT1Q99873 361 aaKnown RBP10.29□□□□□ -0.76
UFD1-205ENST00000459854 TMEM47Q9BQJ4 181 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 SIKE1Q9BRV8 207 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
UFD1-205ENST00000459854 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms