RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CBWD3Q5JTY5 395 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CBWD5Q5RIA9 395 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FAM114A1Q8IWE2 563 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 DRC7Q8IY82 874 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 KCNN1Q92952 543 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 SCLYQ96I15 445 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FBXL18Q96ME1 805 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
USP39-210ENST00000459775 DONSONQ9NYP3 566 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 SUN2Q9UH99 717 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 TNFSF13BQ9Y275 285 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 LGALS16A8MUM7 142 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 M0QZ92 97 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 EPHB6O15197 1021 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 EXTL3O43909 919 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CXCL8P10145 99 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 GCLMP48507 274 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
USP39-210ENST00000459775 MCL1Q07820 350 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CYP24A1Q07973 514 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP39-210ENST00000459775 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 TMC6Q7Z403 805 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FRMD5Q7Z6J6 570 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 ANKRD13BQ86YJ7 626 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CPLX3Q8WVH0 158 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FAM117AQ9C073 453 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 PADI3Q9ULW8 664 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 ACTN1P12814 892 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 AKAP5P24588 427 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 CYP2C18P33260 490 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 VAMP7P51809 220 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 NAP1L1P55209 391 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 BFSP1Q12934 665 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 SYCP1Q15431 976 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 ENOX2Q16206 610 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 UBXN11Q5T124 520 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 NXF3Q9H4D5 531 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 RBAKQ9NYW8 714 aaPredicted RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 SIP14410 1827 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 CEP290O15078 2479 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 ZNF233A6NK53 670 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 OGTO15294 1046 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 NBNO60934 754 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 GNA14O95837 355 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 STAG3L1P0CL83 205 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP39-210ENST00000459775 ITGB8P26012 769 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 SLFN12LQ6IEE8 588 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 ANKRD20A12PQ8NF67 263 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 PARD3BQ8TEW8 1205 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 MRFAP1L1Q96HT8 127 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 PRIMPOLQ96LW4 560 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 MFSD14AQ96MC6 490 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
USP39-210ENST00000459775 CGNQ9P2M7 1197 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 CPSF3Q9UKF6 684 aaKnown RBP11.17□□□□□ -0.62
USP39-210ENST00000459775 SYN1P17600 705 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 SLC9A1P19634 815 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 ABCD1P33897 745 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 PBX1P40424 430 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 AFF1P51825 1210 aaKnown RBP11.16□□□□□ -0.62
USP39-210ENST00000459775 TERF1P54274 439 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 SNRPFP62306 86 aaKnown RBP11.16□□□□□ -0.62
USP39-210ENST00000459775 IFT88Q13099 833 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 FILIP1LQ4L180 1135 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 TWF2Q6IBS0 349 aaKnown RBP11.16□□□□□ -0.62
USP39-210ENST00000459775 VSTM4Q8IW00 320 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 LPPQ93052 612 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 MKNK1Q9BUB5 465 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 SEZ6LQ9BYH1 1024 aa11.16□□□□□ -0.62
USP39-210ENST00000459775 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
USP39-210ENST00000459775 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
USP39-210ENST00000459775 KRT13P13646 458 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 NOTUMQ6P988 496 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
USP39-210ENST00000459775 ANKRD33Q7Z3H0 272 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms