RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SNX24Q9Y343 169 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MYH11P35749 1972 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 RIPK2O43353 540 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 SORBS3O60504 671 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 CCNE2O96020 404 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PYGMP11217 842 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ATF2P15336 505 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ADSSP30520 456 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ICAM3P32942 547 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 RPL21P46778 160 aaKnown RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 LIG3P49916 1009 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 BACE1P56817 501 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 COPS2P61201 443 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 TGFB2P61812 414 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 MCL1Q07820 350 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ACTN3Q08043 901 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 TRADDQ15628 312 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 UGCGQ16739 394 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ZACNQ401N2 412 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 LACTB2Q53H82 288 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 RNF187Q5TA31 235 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 LRRC38Q5VT99 294 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 C6orf89Q6UWU4 347 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 SLC30A10Q6XR72 485 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 C15orf39Q6ZRI6 1047 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ANO5Q75V66 913 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PALB2Q86YC2 1186 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 KATNAL2Q8IYT4 538 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ANKRD35Q8N283 1001 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ATL2Q8NHH9 583 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 DEPTORQ8TB45 409 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PLEKHO2Q8TD55 490 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PSPC1Q8WXF1 523 aaKnown RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 DDX1Q92499 740 aaKnown RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 RAPGEF5Q92565 580 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 KRT35Q92764 455 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 GLG1Q92896 1179 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 FAXDC2Q96IV6 333 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 TTC25Q96NG3 672 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PHACTR1Q9C0D0 580 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 IKZF4Q9H2S9 585 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PLEKHA4Q9H4M7 779 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ACAD9Q9H845 621 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 POLD4Q9HCU8 107 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ERVK-5Q9HDB9 667 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF277Q9NRM2 450 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 INTS9Q9NV88 658 aaKnown RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 GABBR1Q9UBS5 961 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 FBXO40Q9UH90 709 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ASIC3Q9UHC3 531 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 SEPT9Q9UHD8 586 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-202ENST00000459727 ACTL7BQ9Y614 415 aa9.44□□□□□ -0.9
HDAC3-202ENST00000459727 SPATA31C2B4DYI2 1134 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SMAPO00193 183 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PROSCO94903 275 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CYP1A1P04798 512 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CALB1P05937 261 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ABHD2P08910 425 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SUPT20HL2P0C7V6 817 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 RARAP10276 462 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 UNGP13051 313 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 KCNA2P16389 499 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 FLT3P36888 993 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 BAG6P46379 1132 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 EFNA5P52803 228 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 POLGP54098 1239 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PRKCEQ02156 737 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 KRT17Q04695 432 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CXCL9Q07325 125 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SPP2Q13103 211 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 MTMR2Q13614 643 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SLC29A2Q14542 456 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 R3HDM1Q15032 1099 aaKnown RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CCNG2Q16589 344 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PTPROQ16827 1216 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SUPT20HL1Q3ZLR7 823 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 TNFAIP8L3Q5GJ75 292 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ICE2Q659A1 982 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PLA2G4FQ68DD2 849 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 TTC19Q6DKK2 380 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ZPBP2Q6X784 338 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PPP1R21Q6ZMI0 780 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PHF13Q86YI8 300 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CHST13Q8NET6 341 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 OR2W6PQ8NHA6 318 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 EXD1Q8NHP7 514 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ATXN2LQ8WWM7 1075 aaKnown RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SLC7A3Q8WY07 619 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms