RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 C1orf210Q8IVY1 113 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DAGLBQ8NCG7 672 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 WHAMMQ8TF30 809 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 TCP11Q8WWU5 503 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 AUTS2Q8WXX7 1259 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 PHKBQ93100 1093 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 NLRP4Q96MN2 994 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 MBOAT7Q96N66 472 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 FDXACB1Q9BRP7 624 aaPredicted RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 IER2Q9BTL4 223 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 UNC45AQ9H3U1 944 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DHX33Q9H6R0 707 aaKnown RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DLGAP2Q9P1A6 1054 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 SUCLA2Q9P2R7 463 aaPredicted RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 DNAJB4Q9UDY4 337 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 INPP5FQ9Y2H2 1132 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 FAN1Q9Y2M0 1017 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 PCDHB2Q9Y5E7 798 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 PCDHGA2Q9Y5H1 932 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 HRH3Q9Y5N1 445 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 SF3B1O75533 1304 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS8-214ENST00000458721 CCDC195A0A1B0GUA6 201 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 NRP1O14786 923 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TBX3O15119 743 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TEX28O15482 410 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 CHMP2AO43633 222 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 PI15O43692 258 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 KINO60870 393 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 N4BP1O75113 896 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 HNRNPA1P09651 372 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS8-214ENST00000458721 LAMP2P13473 410 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 FGFR4P22455 802 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 QARSP47897 775 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 AK2P54819 239 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 EVCP57679 992 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 STARD6P59095 220 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 PFKPQ01813 784 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 PRKCQQ04759 706 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 NCBP1Q09161 790 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 GRIK3Q13003 919 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 DRP2Q13474 957 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 HTR4Q13639 388 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 MXD4Q14582 209 aaPredicted RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 NTRK3Q16288 839 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 USP41Q3LFD5 358 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 KIAA0319Q5VV43 1072 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TMEM214Q6NUQ4 689 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 PDXDC1Q6P996 788 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 ANO5Q75V66 913 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TRMT1LQ7Z2T5 733 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 ZNF280BQ86YH2 543 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 SLC44A3Q8N4M1 653 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 ETNPPLQ8TBG4 499 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 KCNG4Q8TDN1 519 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TBCKQ8TEA7 893 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 SMG7Q92540 1137 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 LPPQ93052 612 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 SECISBP2LQ93073 1101 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 GTPBP3Q969Y2 492 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 RMDN1Q96DB5 314 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 FAM20AQ96MK3 541 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 NAP1L4Q99733 375 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 DDX23Q9BUQ8 820 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 FAM126AQ9BYI3 521 aaPredicted RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 GBP3Q9H0R5 595 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 MARCH5Q9NX47 278 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 GIT1Q9Y2X7 761 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
VPS8-214ENST00000458721 TPRP12270 2363 aaKnown RBP6.31□□□□□ -1.4
VPS8-214ENST00000458721 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ARL5CA6NH57 179 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 PRR5-ARHGAP8B1AHC4 643 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 EPB41L2O43491 1005 aaKnown RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 B4GALT3O60512 393 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 DDHD2O94830 711 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 STBD1O95210 358 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 DEXIO95424 95 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 P4HBP07237 508 aaKnown RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 SP9P0CG40 484 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ITGA4P13612 1032 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 HOXA11P31270 313 aaPredicted RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 RPS9P46781 194 aaKnown RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 ARHGAP8P85298 464 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 LMNB2Q03252 620 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
VPS8-214ENST00000458721 TFDP1Q14186 410 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 LIN9Q5TKA1 542 aa6.3□□□□□ -1.4
VPS8-214ENST00000458721 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms