RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 ANKS3Q6ZW76 656 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 NECAB1Q8N987 351 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 ST13P5Q8NFI4 369 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-227ENST00000458564 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 NELL1Q92832 810 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 CLDN23Q96B33 292 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
HDLBP-227ENST00000458564 LTB4R2Q9NPC1 389 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 DNMT3BQ9UBC3 853 aaKnown RBP11.49□□□□□ -0.57
HDLBP-227ENST00000458564 POLIQ9UNA4 740 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 ARHGEF37A1IGU5 675 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 ARHGEF35A5YM69 484 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 LAMTOR5O43504 91 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 MCM7P33993 719 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 RPS9P46781 194 aaKnown RBP11.48□□□□□ -0.57
HDLBP-227ENST00000458564 CLCNKBP51801 687 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 UBXN2BQ14CS0 331 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 CD300LGQ6UXG3 332 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 APBB1IPQ7Z5R6 666 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-227ENST00000458564 ZBTB44Q8NCP5 570 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 KIFAP3Q92845 792 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 NELL2Q99435 816 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 MTF2Q9Y483 593 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-227ENST00000458564 CDY1Q9Y6F8 540 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 COL4A3Q01955 1670 aa11.48□□□□□ -0.57
HDLBP-227ENST00000458564 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 FAM170BA6NMN3 283 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 JAK2O60674 1132 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 RHOP08100 348 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 OR52Z1P0C646 297 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 IGFBP6P24592 240 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 TKTP29401 623 aaKnown RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 ROR1Q01973 937 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 SLC5A9Q2M3M2 681 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 GLRA4Q5JXX5 417 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 ZBTB41Q5SVQ8 909 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 NT5DC1Q5TFE4 455 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 ATF7IP2Q5U623 682 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 HAUS3Q68CZ6 603 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 DNASE1L2Q92874 299 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 IFT74Q96LB3 600 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 PRMT8Q9NR22 394 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 SPATA6Q9NWH7 488 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 TNFSF13BQ9Y275 285 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 MRPS23Q9Y3D9 190 aaKnown RBP11.47□□□□□ -0.57
HDLBP-227ENST00000458564 F5P12259 2224 aa11.47□□□□□ -0.57
HDLBP-227ENST00000458564 PHLPP2Q6ZVD8 1323 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SHISA7A6NL88 538 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SYN3O14994 580 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 NCAM2O15394 837 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 TBC1D4O60343 1298 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 LILRB5O75023 590 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 MICAL2O94851 1124 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ABLIM3O94929 683 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 GRM5P41594 1212 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ST3GAL1Q11201 340 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SAFBQ15424 915 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ALKAL1Q6UXT8 129 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 TPRG1Q6ZUI0 275 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 DCLK2Q8N568 766 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 GPR161Q8N6U8 529 aaKnown RBP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ING5Q8WYH8 240 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ELSPBP1Q96BH3 223 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 EPC1Q9H2F5 836 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 PTPRHQ9HD43 1115 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 SLC38A7Q9NVC3 462 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 ZSCAN32Q9NX65 697 aa11.46□□□□□ -0.57
HDLBP-227ENST00000458564 MRPS17Q9Y2R5 130 aaKnown RBP11.46□□□□□ -0.57
HDLBP-227ENST00000458564 EPG5Q9HCE0 2579 aa11.46□□□□□ -0.58
HDLBP-227ENST00000458564 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
HDLBP-227ENST00000458564 WDR27A2RRH5 827 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 ATF2P15336 505 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 KCNE1P15382 129 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 CEBPBP17676 345 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 LIG1P18858 919 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 CD72P21854 359 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 FCARP24071 287 aa11.45□□□□□ -0.58
HDLBP-227ENST00000458564 BRCC3P46736 316 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms