RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 CACNG4Q9UBN1 327 aa11.27□□□□□ -0.61
TOP3B-212ENST00000456075 HPSEQ9Y251 543 aa11.27□□□□□ -0.61
TOP3B-212ENST00000456075 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.61
TOP3B-212ENST00000456075 F8W810 466 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 PODXLO00592 558 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 PPP1R37O75864 691 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 ADH1AP07327 375 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 KLRC2P26717 231 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CASP1P29466 404 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 RPL9P32969 192 aaKnown RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 TNFSF9P41273 254 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 ACOT2P49753 483 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CLCNKBP51801 687 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CASP5P51878 434 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 SLC10A6Q3KNW5 377 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 XKR4Q5GH76 650 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 PTCRAQ6ISU1 281 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 KANK3Q6NY19 840 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 ARMCX5Q6P1M9 558 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 SLC39A4Q6P5W5 647 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 PDXDC1Q6P996 788 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 ALKAL1Q6UXT8 129 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 HS2ST1Q7LGA3 356 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CD302Q8IX05 232 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 HPS3Q969F9 1004 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 PAAF1Q9BRP4 392 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 STRA6Q9BX79 667 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CXCL16Q9H2A7 254 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 GOLGA2P5Q9HBQ8 144 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 CD207Q9UJ71 328 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 UBQLN1Q9UMX0 589 aaKnown RBP11.26□□□□□ -0.61
TOP3B-212ENST00000456075 IRAK3Q9Y616 596 aa11.26□□□□□ -0.61
TOP3B-212ENST00000456075 VCANP13611 3396 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TTC26A0AVF1 554 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 LACTBL1A8MY62 500 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TISP43B9A030 160 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TBX10O75333 385 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 GARTP22102 1010 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 DSG1Q02413 1049 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 SPAG1Q07617 926 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 KCNA1Q09470 495 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 COL19A1Q14993 1142 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 NAB2Q15742 525 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 UPP1Q16831 310 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 ADAMTS19Q8TE59 1207 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 C18orf25Q96B23 403 aaPredicted RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 B3GALT6Q96L58 329 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 FAM213AQ9BRX8 229 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 FGFBP2Q9BYJ0 223 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 GPR62Q9BZJ7 368 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 DPP7Q9UHL4 492 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 HOOK1Q9UJC3 728 aaKnown RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 CPSF3Q9UKF6 684 aaKnown RBP11.25□□□□□ -0.61
TOP3B-212ENST00000456075 HCFC2Q9Y5Z7 792 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 STYXL1Q9Y6J8 313 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 UBE4BO95155 1302 aa11.25□□□□□ -0.61
TOP3B-212ENST00000456075 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 TMEM189-UBE2V1I3L0A0 370 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 ZNF202O95125 648 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 KIF20AO95235 890 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 IL18RAPO95256 599 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 CNPP09543 421 aaKnown RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 HOXB8P17481 243 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 MCM4P33991 863 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 LTBRP36941 435 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 PSMD2Q13200 908 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 CES5AQ6NT32 575 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 UHRF1Q96T88 793 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-212ENST00000456075 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
TOP3B-212ENST00000456075 PCIF1Q9H4Z3 704 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms