RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 PTPRHQ9HD43 1115 aa20.59■□□□□ 0.89
COL20A1-204ENST00000455906 ARHGEF3Q9NR81 526 aa20.59■□□□□ 0.89
COL20A1-204ENST00000455906 PCDHB6Q9Y5E3 794 aa20.59■□□□□ 0.89
COL20A1-204ENST00000455906 PHLPP2Q6ZVD8 1323 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 SMIM28A0A1B0GU29 152 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 PP2D1A8MPX8 630 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 E9PMD0 336 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 TKTP29401 623 aaKnown RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 NPTX2P47972 431 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 PEX3P56589 373 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 SOX4Q06945 474 aaPredicted RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 IL17AQ16552 155 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 XKR4Q5GH76 650 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 AXDND1Q5T1B0 1012 aaPredicted RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 ALKAL1Q6UXT8 129 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 ITFG1Q8TB96 612 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 FGF13Q92913 245 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 DDX27Q96GQ7 796 aaKnown RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 UROC1Q96N76 676 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 ACO2Q99798 780 aaKnown RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 SH2B1Q9NRF2 756 aaPredicted RBP20.58■□□□□ 0.89
COL20A1-204ENST00000455906 DLGAP2Q9P1A6 1054 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 ARHGAP28Q9P2N2 729 aa20.58■□□□□ 0.89
COL20A1-204ENST00000455906 CITO14578 2027 aa20.58■□□□□ 0.88
COL20A1-204ENST00000455906 I3L4J1 428 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 XYLBO75191 536 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 GRM5P41594 1212 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 BRCC3P46736 316 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 MAPK7Q13164 816 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 UVSSAQ2YD98 709 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 HCFC1R1Q9NWW0 138 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 POLIQ9UNA4 740 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 BACE2Q9Y5Z0 518 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 STK24Q9Y6E0 443 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 CDY1Q9Y6F8 540 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 COL4A3Q01955 1670 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 CACNA1IQ9P0X4 2223 aa20.57■□□□□ 0.88
COL20A1-204ENST00000455906 CCDC169A6NNP5 214 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 ABLIM1O14639 778 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 HIP1RO75146 1068 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 DCNP07585 359 aaKnown RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 RFX1P22670 979 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 GPC5P78333 572 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 ZNF568Q3ZCX4 644 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 APBB1IPQ7Z5R6 666 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 ZMAT2Q96NC0 199 aaKnown RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 MMTAG2Q9BU76 263 aaKnown RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 RUSC1Q9BVN2 902 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 TARS2Q9BW92 718 aaKnown RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 RAB34Q9BZG1 259 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 DNMT3BQ9UBC3 853 aaKnown RBP20.56■□□□□ 0.88
COL20A1-204ENST00000455906 DNM3Q9UQ16 869 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 DMXL1Q9Y485 3027 aa20.56■□□□□ 0.88
COL20A1-204ENST00000455906 MIA3Q5JRA6 1907 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 FANCMQ8IYD8 2048 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 PROZP22891 400 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 CDC25AP30304 524 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 OSTNP61366 133 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 DMP1Q13316 513 aaPredicted RBP20.55■□□□□ 0.88
COL20A1-204ENST00000455906 RINT1Q6NUQ1 792 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 ANKS3Q6ZW76 656 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 RTL10Q7L3V2 364 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 CCDC94Q9BW85 323 aaPredicted RBP20.55■□□□□ 0.88
COL20A1-204ENST00000455906 MRPL4Q9BYD3 311 aaKnown RBP20.55■□□□□ 0.88
COL20A1-204ENST00000455906 FOXQ1Q9C009 403 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 SIT1Q9Y3P8 196 aa20.55■□□□□ 0.88
COL20A1-204ENST00000455906 PDCD11Q14690 1871 aaKnown RBP20.55■□□□□ 0.88
COL20A1-204ENST00000455906 MYH11P35749 1972 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 MEFVO15553 781 aaPredicted RBP20.54■□□□□ 0.88
COL20A1-204ENST00000455906 TRAPPC3O43617 180 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 GLULP15104 373 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 YARSP54577 528 aaKnown RBP20.54■□□□□ 0.88
COL20A1-204ENST00000455906 STARD6P59095 220 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 SPECC1Q5M775 1068 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 KRT79Q5XKE5 535 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 C1orf186Q6ZWK4 172 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 MTSS1LQ765P7 747 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 NPAS3Q8IXF0 933 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 PJA1Q8NG27 643 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 SNX27Q96L92 541 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 KMT5AQ9NQR1 393 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.54■□□□□ 0.88
COL20A1-204ENST00000455906 TOPORSQ9NS56 1045 aaPredicted RBP20.54■□□□□ 0.88
COL20A1-204ENST00000455906 KCNH3Q9ULD8 1083 aa20.54■□□□□ 0.88
COL20A1-204ENST00000455906 LAD1O00515 517 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 MCF2P10911 925 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 KCNE1P15382 129 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 PRPHP41219 470 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 ROR1Q01973 937 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 PABPC1LQ4VXU2 614 aaKnown RBP20.53■□□□□ 0.88
COL20A1-204ENST00000455906 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 POTEHQ6S545 545 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 DRC1Q96MC2 740 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 CNTN3Q9P232 1028 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
COL20A1-204ENST00000455906 DNAH14Q0VDD8 3507 aa20.53■□□□□ 0.88
COL20A1-204ENST00000455906 OTOGLQ3ZCN5 2332 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms