RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 HVCN1Q96D96 273 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 MSLNLQ96KJ4 702 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 MAGEF1Q9HAY2 307 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 KBTBD4Q9NVX7 518 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 EXOC7Q9UPT5 735 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
COPS7A-202ENST00000455113 SMIM28A0A1B0GU29 152 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ABLIM1O14639 778 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 SLFN12LQ6IEE8 588 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ELMSAN1Q6PJG2 1045 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ZNF720Q7Z2F6 126 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 MAP4K3Q8IVH8 894 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 SMRP1Q8NCR6 262 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 RABGGTAQ92696 567 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 SNX27Q96L92 541 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PPP1R10Q96QC0 940 aaKnown RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 VN1R3Q9BXE9 311 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PANK4Q9NVE7 773 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 HOOK1Q9UJC3 728 aaKnown RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PCDHB13Q9Y5F0 798 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 B3GAT3O94766 335 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 GCNT3O95395 438 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PIGRP01833 764 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ADH1AP07327 375 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 CLTAP09496 248 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 CREMQ03060 361 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PNOCQ13519 176 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 POSTNQ15063 836 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 SMAD2Q15796 467 aaKnown RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ZC2HC1CQ53FD0 456 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ANKRD54Q6NXT1 300 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 STXBP4Q6ZWJ1 553 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 HASPINQ8TF76 798 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 ERCC4Q92889 916 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 DNAJC19Q96DA6 116 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 DDX27Q96GQ7 796 aaKnown RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 NECAB3Q96P71 396 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 FIZ1Q96SL8 496 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 POP1Q99575 1024 aaKnown RBP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 MSTO1Q9BUK6 570 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PLEKHA5Q9HAU0 1116 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.34■□□□□ 0.69
COPS7A-202ENST00000455113 PRKAG3Q9UGI9 489 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 DPP7Q9UHL4 492 aa19.34■□□□□ 0.69
COPS7A-202ENST00000455113 TRAPPC3O43617 180 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 PRR29P0C7W0 189 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.68
COPS7A-202ENST00000455113 DSG1Q02413 1049 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 ALCAMQ13740 583 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 KCNC3Q14003 757 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 CES5AQ6NT32 575 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 ALKAL1Q6UXT8 129 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 PAAF1Q9BRP4 392 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 GPR62Q9BZJ7 368 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 OLFML3Q9NRN5 406 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 TBC1D7Q9P0N9 293 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 CNTN3Q9P232 1028 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 CACNG4Q9UBN1 327 aa19.33■□□□□ 0.68
COPS7A-202ENST00000455113 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.33■□□□□ 0.68
COPS7A-202ENST00000455113 F8W810 466 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 OGTO15294 1046 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 KIF4AO95239 1232 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 PPP2R3AQ06190 1150 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 NAB2Q15742 525 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 ZSCAN23Q3MJ62 389 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 SEZ6Q53EL9 994 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 XKR4Q5GH76 650 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 DCLRE1AQ6PJP8 1040 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 TAS1R1Q7RTX1 841 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 CEP57Q86XR8 500 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 RNF168Q8IYW5 571 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-202ENST00000455113 VN1R2Q8NFZ6 395 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 KLHL5Q96PQ7 755 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 CXCL16Q9H2A7 254 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 RPF1Q9H9Y2 349 aaKnown RBP19.32■□□□□ 0.68
COPS7A-202ENST00000455113 DZANK1Q9NVP4 752 aa19.32■□□□□ 0.68
COPS7A-202ENST00000455113 XPOTO43592 962 aaKnown RBP19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CNPP09543 421 aaKnown RBP19.31■□□□□ 0.68
COPS7A-202ENST00000455113 KCNE1P15382 129 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CASP1P29466 404 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CLCNKBP51801 687 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 PDXDC1Q6P996 788 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 RBM43Q6ZSC3 357 aaKnown RBP19.31■□□□□ 0.68
COPS7A-202ENST00000455113 GPR65Q8IYL9 337 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 ACCSQ96QU6 501 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 BLZF1Q9H2G9 400 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CHST7Q9NS84 486 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CXCL8P10145 99 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 ASIC1P78348 528 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 ITIH3Q06033 890 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 CUL4BQ13620 913 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 SLC10A6Q3KNW5 377 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 FAM171A1Q5VUB5 890 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 KIAA0319Q5VV43 1072 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 GJD3Q8N144 294 aa19.31■□□□□ 0.68
COPS7A-202ENST00000455113 RIN2Q8WYP3 895 aaPredicted RBP19.31■□□□□ 0.68
COPS7A-202ENST00000455113 TTPALQ9BTX7 342 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms