RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RAPGEF5Q92565 580 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 HOMER2Q9NSB8 354 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 C1orf112Q9NSG2 853 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 A0A0G2JMZ2 1700 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 RIPK2O43353 540 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 CAND2O75155 1236 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 TCEA3O75764 348 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 ECEL1O95672 775 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 LDHAP00338 332 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 ITIH2P19823 946 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 COPB2P35606 906 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 SLFN12LQ6IEE8 588 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 MON1BQ7L1V2 547 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 RELL1Q8IUW5 271 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 OTUD6BQ8N6M0 293 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 ZNF516Q92618 1163 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 XPO6Q96QU8 1125 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 TRIM31Q9BZY9 425 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 JPH1Q9HDC5 661 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 RIPK3Q9Y572 518 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
ECHDC1-209ENST00000454591 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 TP73O15350 636 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 SHBGP04278 402 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ACO1P21399 889 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 DRD4P21917 467 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 IVDP26440 423 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 MAPK4P31152 587 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ACTR2P61160 394 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 PRKCEQ02156 737 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 GRM1Q13255 1194 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 GNPTABQ3T906 1256 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ADAT2Q7Z6V5 191 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ZNF280CQ8ND82 737 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ZNF317Q96PQ6 595 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 CEP89Q96ST8 783 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 DHX33Q9H6R0 707 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 MAFBQ9Y5Q3 323 aaPredicted RBP13.38□□□□□ -0.27
ECHDC1-209ENST00000454591 TCRBV7S2A1N4TA0A589 114 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 DCDC2CA8MYV0 355 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SORBS3O60504 671 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 PROSCO94903 275 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 GHRP10912 638 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 PTPRAP18433 802 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 NAMPTP43490 491 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 KLF1Q13351 362 aaPredicted RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SLC29A2Q14542 456 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 PLEKHA7Q6IQ23 1121 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 CCDC60Q8IWA6 550 aaPredicted RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 UBR7Q8N806 425 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 DNERQ8NFT8 737 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 NIFKQ9BYG3 293 aaKnown RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 FOXP3Q9BZS1 431 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 ACP6Q9NPH0 428 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 CYP39A1Q9NYL5 469 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 DDX20Q9UHI6 824 aaKnown RBP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 NEU2Q9Y3R4 380 aa13.37□□□□□ -0.27
ECHDC1-209ENST00000454591 UMODL1Q5DID0 1318 aa13.36□□□□□ -0.27
ECHDC1-209ENST00000454591 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms