RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 MED25Q71SY5 747 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 GRASPQ7Z6J2 395 aaPredicted RBP3.31□□□□□ -1.88
LRCH3-209ENST00000452660 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 CYFIP2Q96F07 1278 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 ORAI2Q96SN7 254 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 DNAJC2Q99543 621 aaKnown RBP3.31□□□□□ -1.88
LRCH3-209ENST00000452660 TARS2Q9BW92 718 aaKnown RBP3.31□□□□□ -1.88
LRCH3-209ENST00000452660 GREM2Q9H772 168 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 ZSWIM4Q9H7M6 989 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 KIAA1586Q9HCI6 787 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 KCTD5Q9NXV2 234 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 ARPP21Q9UBL0 812 aaPredicted RBP3.31□□□□□ -1.88
LRCH3-209ENST00000452660 MAPRE3Q9UPY8 281 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 MAP3K2Q9Y2U5 619 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 ENTPD2Q9Y5L3 495 aa3.31□□□□□ -1.88
LRCH3-209ENST00000452660 PROM1O43490 865 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ENDOD1O94919 500 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ZFPL1O95159 310 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 GPANK1O95872 356 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ALAS1P13196 640 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 FGFR4P22455 802 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 PTPN7P35236 360 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 FOLR3P41439 243 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 FAPQ12884 760 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 UBXN2BQ14CS0 331 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 CYP2A13Q16696 494 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ATP13A4Q4VNC1 1196 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 CNNM4Q6P4Q7 775 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ACTRT2Q8TDY3 377 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 ZNF384Q8TF68 577 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 NUP133Q8WUM0 1156 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 RIN2Q8WYP3 895 aaPredicted RBP3.3□□□□□ -1.88
LRCH3-209ENST00000452660 HOXB13Q92826 284 aaPredicted RBP3.3□□□□□ -1.88
LRCH3-209ENST00000452660 AIFM2Q9BRQ8 373 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 MRI1Q9BV20 369 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 CASS4Q9NQ75 786 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 LANCL2Q9NS86 450 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 RBM12Q9NTZ6 932 aaKnown RBP3.3□□□□□ -1.88
LRCH3-209ENST00000452660 NEU2Q9Y3R4 380 aa3.3□□□□□ -1.88
LRCH3-209ENST00000452660 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 DNAJC9-AS1A6NH13 148 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 GSG1L2A8MUP6 293 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 MPPED1O15442 326 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 ADCY6O43306 1168 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 AKR1B10O60218 316 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 SRGNP10124 158 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 CKBP12277 381 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 ATP5JP18859 108 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 SREBF1P36956 1147 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 PTH2RP49190 550 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 PDCD1Q15116 288 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 ADRM1Q16186 407 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 Q6ZVL8 140 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 KIAA0907Q7Z7F0 614 aaPredicted RBP3.29□□□□□ -1.88
LRCH3-209ENST00000452660 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
LRCH3-209ENST00000452660 C9orf106Q8NAJ2 232 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 AUTS2Q8WXX7 1259 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 UBXN4Q92575 508 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 SARAFQ96BY9 339 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 RNF31Q96EP0 1072 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 PNKPQ96T60 521 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 PRDM12Q9H4Q4 367 aa3.29□□□□□ -1.88
LRCH3-209ENST00000452660 UNKLQ9H9P5 680 aaKnown RBP3.29□□□□□ -1.88
LRCH3-209ENST00000452660 APOBEC2Q9Y235 224 aaKnown RBP3.29□□□□□ -1.88
LRCH3-209ENST00000452660 LPLP06858 475 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 PLA2G5P39877 138 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 TKFCQ3LXA3 575 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 DALRD3Q5D0E6 543 aaKnown RBP3.28□□□□□ -1.88
LRCH3-209ENST00000452660 CT83Q5H943 113 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 MUM1L1Q5H9M0 696 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 AFMIDQ63HM1 303 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 BHLHA9Q7RTU4 235 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 SH2D3CQ8N5H7 860 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 NACC2Q96BF6 587 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 EAF2Q96CJ1 260 aaPredicted RBP3.28□□□□□ -1.88
LRCH3-209ENST00000452660 PTCD3Q96EY7 689 aaKnown RBP3.28□□□□□ -1.88
LRCH3-209ENST00000452660 MS4A5Q9H3V2 200 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 IFT22Q9H7X7 185 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 TMEM140Q9NV12 185 aa3.28□□□□□ -1.88
LRCH3-209ENST00000452660 A0A1W2PS29 197 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 LCHNA4D1U4 455 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 FAM171A2A8MVW0 826 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 MGST3O14880 152 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 PEX1O43933 1283 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 CDC45O75419 566 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 KRTAP10-9P60411 292 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 MGAT2Q10469 447 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 ATP2B3Q16720 1220 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 MUM1Q2TAK8 710 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 CCDC144BQ3MJ40 725 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 TAF7LQ5H9L4 462 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 ZNF788Q6ZQV5 615 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 KCNK18Q7Z418 384 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 ARHGEF25Q86VW2 580 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 PQLC1Q8N2U9 271 aa3.27□□□□□ -1.89
LRCH3-209ENST00000452660 NLGN4YQ8NFZ3 816 aaPredicted RBP3.27□□□□□ -1.89
LRCH3-209ENST00000452660 HASPINQ8TF76 798 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms