RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 PHLPP2Q6ZVD8 1323 aa20.18■□□□□ 0.82
PDLIM2-214ENST00000452226 B3GAT3O94766 335 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 ZSCAN22P10073 491 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 CLCN5P51795 746 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 SLC12A3P55017 1021 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 MAPK7Q13164 816 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 ZNF568Q3ZCX4 644 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 PDXDC1Q6P996 788 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 CEP120Q8N960 986 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 FLCNQ8NFG4 579 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 LRRC15Q8TF66 581 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 RSAD2Q8WXG1 361 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 CDK5RAP3Q96JB5 506 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 PLIN2Q99541 437 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 MRPL4Q9BYD3 311 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 CDT1Q9H211 546 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 TMEM134Q9H6X4 195 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 KMT5AQ9NQR1 393 aa20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 RBM19Q9Y4C8 960 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-214ENST00000452226 USP34Q70CQ2 3546 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 TMEM189-UBE2V1I3L0A0 370 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 ADAM12O43184 909 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 IGFBP6P24592 240 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 GUCY2CP25092 1073 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 GRM5P41594 1212 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 CLCNKBP51801 687 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 YARSP54577 528 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 OSTNP61366 133 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 PKP1Q13835 747 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 LIN9Q5TKA1 542 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 GET4Q7L5D6 327 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 SPRYD3Q8NCJ5 442 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 CALML4Q96GE6 196 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 UROC1Q96N76 676 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 TIPINQ9BVW5 301 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 CCDC94Q9BW85 323 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 TARS2Q9BW92 718 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 C17orf75Q9HAS0 396 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 PTPRHQ9HD43 1115 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 TOPORSQ9NS56 1045 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 BLOC1S4Q9NUP1 217 aa20.16■□□□□ 0.82
PDLIM2-214ENST00000452226 SMIM28A0A1B0GU29 152 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 SFI1A8K8P3 1242 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 PROB1E7EW31 1015 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 SLC16A4O15374 487 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 NARSO43776 548 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 F13A1P00488 732 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 PLA2G4BP0C869 781 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 LAMP2P13473 410 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 FGFR3P22607 806 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 KARSQ15046 597 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 UPP1Q16831 310 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 PPM1LQ5SGD2 360 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 USP49Q70CQ1 688 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 SIX5Q8N196 739 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 EPSTI1Q96J88 318 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 CLIC6Q96NY7 704 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 TCHPQ9BT92 498 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 GOLGA2P5Q9HBQ8 144 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 KCND2Q9NZV8 630 aa20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 PTPRZ1P23471 2315 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-214ENST00000452226 RIF1Q5UIP0 2472 aaKnown RBP20.14■□□□□ 0.82
PDLIM2-214ENST00000452226 C8AP07357 584 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 HNRNPA1P09651 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 OR1D2P34982 312 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 RAD51AP2Q09MP3 1159 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 CWF19L1Q69YN2 538 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 CD300LGQ6UXG3 332 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 ALKAL1Q6UXT8 129 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 GRASPQ7Z6J2 395 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 SLC44A3Q8N4M1 653 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 NXPE3Q969Y0 559 aa20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 ZNF396Q96N95 335 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-214ENST00000452226 VPS13AQ96RL7 3174 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 TRAPPC3O43617 180 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 CFHP08603 1231 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 MCF2P10911 925 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 NPR3P17342 541 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 PLCG1P19174 1290 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 FSHRP23945 695 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 SOX4Q06945 474 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 RAB33AQ14088 237 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 ARSHQ5FYA8 562 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 XKR4Q5GH76 650 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 MPZL3Q6UWV2 235 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 KRI1Q8N9T8 703 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 C3orf58Q8NDZ4 430 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 NTPCRQ9BSD7 190 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 SLC38A7Q9NVC3 462 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms